RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA541476", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA541476 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27520235 27520235 PRJNA541476_P_NODE_4943_length_512_cov_2.719818_g4742_i0 PRJNA541476 4943 512 2.719818 13.92546816 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 70.1 8.45e-12   NR MBV6458683.1 2682144 g4742 i0 40.8 0.57421875 98 57 57.4 1 217 510 3 99 MBV6458683.1 Spore protein SP21 [Fimbriimonadaceae bacterium] diamond 294 70.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30741348 30741348 PRJNA541476_P_NODE_37034_length_244_cov_1.385965_g36828_i0 PRJNA541476 37034 244 1.385965 3.3817546 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 54.7 2.3e-6   NR MCW5939724.1 2682144 g36828 i0 42 3 81 45 99.6 1 243 1 372 450 MCW5939724.1 proline--tRNA ligase [Fimbriimonadaceae bacterium] diamond 732 54.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;