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contig_metadata

12 rows where bioproject = "PRJNA541476", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 12 ✖

tax_clade 1

  • Sar · 12 ✖

bioproject 1

  • PRJNA541476 · 12 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11987148 11987148 PRJNA541476_P_NODE_13070_length_325_cov_2.003968_g12864_i0 PRJNA541476 13070 325 2.003968 6.512896 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 60.1 7.65e-8   NR ETO34611.1 46433 g12864 i0 40.2 1.98461538461538 107 30 98.8 1 2 322 229 301 ETO34611.1 hypothetical protein RFI_02478, partial [Reticulomyxa filosa] diamond 645 60.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
15146610 15146610 PRJNA541476_P_NODE_23092_length_270_cov_1.111675_g22886_i0 PRJNA541476 23092 270 1.111675 3.0015225 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 140 1.77e-36   NR ETO17068.1 46433 g22886 i0 77.9 7.86666666666667 86 19 95.6 0 258 1 131 216 ETO17068.1 hypothetical protein RFI_20264 [Reticulomyxa filosa] diamond 2124 140 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
18360824 18360824 PRJNA541476_P_NODE_8235_length_394_cov_1.900312_g8031_i0 PRJNA541476 8235 394 1.900312 7.48722928 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 237 1.06e-72   NR ETO35987.1 46433 g8031 i0 80.2 3.98223350253807 131 26 99.7 0 2 394 80 210 ETO35987.1 hypothetical protein RFI_01076 [Reticulomyxa filosa] diamond 1569 237 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27394130 27394130 PRJNA541476_P_NODE_4303_length_553_cov_2.464583_g4107_i0 PRJNA541476 4303 553 2.464583 13.62914399 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 59.3 3.78e-7   NR ETO05799.1 46433 g4107 i0 35.2 0.477396021699819 88 55 47.7 2 96 359 49 134 ETO05799.1 hypothetical protein RFI_31598 [Reticulomyxa filosa] diamond 264 59.3 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28688712 28688712 PRJNA541476_P_NODE_37247_length_244_cov_0.912281_g37041_i0 PRJNA541476 37247 244 0.912281 2.22596564 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00371   NR ETO33593.1 46433 g37041 i0 37.5 0.885245901639344 72 43 87.3 2 3 215 81 151 ETO33593.1 hypothetical protein RFI_03509 [Reticulomyxa filosa] diamond 216 45.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28924197 28924197 PRJNA541476_P_NODE_3788_length_595_cov_2.095785_g3594_i0 PRJNA541476 3788 595 2.095785 12.46992075 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 49.3 0.00451   NR ETO24613.1 46433 g3594 i0 49 0.922689075630252 49 25 24.7 0 582 436 518 566 ETO24613.1 calcium/calmodulin-dependent protein kinase type 1 (camki) [Reticulomyxa filosa] diamond 549 49.7 0.991951710261569 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29856708 29856708 PRJNA541476_P_NODE_26551_length_258_cov_0.994595_g26345_i0 PRJNA541476 26551 258 0.994595 2.5660551 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0181   NR ETO14685.1 46433 g26345 i0 29.7 0.744186046511628 64 41 69.8 1 188 9 2900 2963 ETO14685.1 hypothetical protein RFI_22684, partial [Reticulomyxa filosa] diamond 192 43.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30077725 30077725 PRJNA541476_P_NODE_32092_length_249_cov_0.880682_g31886_i0 PRJNA541476 32092 249 0.880682 2.19289818 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 98.2 1.24e-21   NR ETO26409.1 46433 g31886 i0 61.8 0.91566265060241 76 27 91.6 2 248 21 1190 1263 ETO26409.1 ubiquitin protein ligase, partial [Reticulomyxa filosa] diamond 228 98.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30440446 30440446 PRJNA541476_P_NODE_8113_length_397_cov_2.496914_g7909_i0 PRJNA541476 8113 397 2.496914 9.91274858 root 1 Root_unresolved Root_unresolved 72 6.27e-13   NR ETO25452.1 46433 g7909 i0 39.8 2.2367758186398 88 50 66.5 1 132 395 44 128 ETO25452.1 Enoyl-CoA hydratase/isomerase [Reticulomyxa filosa] diamond 888 72.4 0.994475138121547 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31120190 31120190 PRJNA541476_P_NODE_13195_length_324_cov_1.796813_g12989_i0 PRJNA541476 13195 324 1.796813 5.82167412 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 133 1.38e-33   NR ETO26164.1 46433 g12989 i0 57.4 6.02777777777778 108 45 99.1 1 4 324 1984 2091 ETO26164.1 ubiquitin protein ligase [Reticulomyxa filosa] diamond 1953 133 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31641265 31641265 PRJNA541476_P_NODE_40356_length_242_cov_0.905325_g40150_i0 PRJNA541476 40356 242 0.905325 2.1908865 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 81.6 7e-16   NR ETO11906.1 46433 g40150 i0 46.2 7.05371900826446 93 36 99.2 2 1 240 367 458 ETO11906.1 hypothetical protein RFI_25471 [Reticulomyxa filosa] diamond 1707 82.4 0.990291262135922 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32527546 32527546 PRJNA541476_P_NODE_7399_length_416_cov_1.364431_g7195_i0 PRJNA541476 7399 416 1.364431 5.67603296 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 223 2.77e-71   NR ETO23564.1 46433 g7195 i0 71.2 18.9158653846154 139 39 99.5 1 414 1 72 210 ETO23564.1 isocitrate dehydrogenase [Reticulomyxa filosa] diamond 7869 223 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;