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contig_metadata

25 rows where bioproject = "PRJNA541476", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 25 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 25 ✖

bioproject 1

  • PRJNA541476 · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6886810 6886810 PRJNA541476_P_NODE_3946_length_579_cov_2.683794_g3751_i0 PRJNA541476 3946 579 2.683794 15.53916726 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 286 1.41e-93   NR RYD65414.1 2026800 g3751 i0 71.5 1.99481865284974 193 52 99.5 2 577 2 138 328 RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] diamond 1155 286 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
11321594 11321594 PRJNA541476_P_NODE_23269_length_269_cov_1.469388_g23063_i0 PRJNA541476 23269 269 1.469388 3.95265372 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 167 1.33e-50   NR MEC7288422.1 2026799 g23063 i0 92.1 1.98513011152416 89 7 99.3 0 3 269 87 175 MEC7288422.1 B12-binding domain-containing protein [Verrucomicrobiota bacterium] diamond 534 167 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
11321625 11321625 PRJNA541476_P_NODE_669_length_1375_cov_12.410138_g573_i0 PRJNA541476 669 1375 12.410138 170.6393975 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 434 1.6399999999999995e-147   NR RYD65414.1 2026800 g573 i0 76.3 0.617454545454545 283 65 61.7 1 1041 193 56 336 RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] diamond 849 434 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
14538050 14538050 PRJNA541476_P_NODE_6332_length_449_cov_2.010638_g6129_i0 PRJNA541476 6332 449 2.010638 9.02776462 Bacteria 2 Bacteria Bacteria 178 4.98e-53   NR PYL92878.1 2026799 g6129 i0 60.5 11.7928730512249 147 58 98.2 0 6 446 48 194 PYL92878.1 MAG: short chain dehydrogenase [Verrucomicrobiota bacterium] diamond 5295 178 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
17696480 17696480 PRJNA541476_P_NODE_2214_length_796_cov_1.449516_g2038_i0 PRJNA541476 2214 796 1.449516 11.53814736 Opitutaceae 134623 Bacteria Bacteria 95.3 1.31e-14   NTclustered gi|573471959|gb|CP007053.1| 794903 g2038 i0 76.087 19.0263819095477 184 42 23 2 465 647 2149300 2149118 Opitutaceae bacterium TAV5, complete genome blastn 15145 95.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium TAV5
19635354 19635354 PRJNA541476_P_NODE_4736_length_523_cov_5.204444_g4536_i0 PRJNA541476 4736 523 5.204444 27.21924212 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 142 1.24e-37   NR RYD71398.1 2026800 g4536 i0 42 0.998087954110899 174 100 99.8 1 2 523 29 201 RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] diamond 522 142 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
26776452 26776452 PRJNA541476_P_NODE_22221_length_273_cov_1.290000_g22015_i0 PRJNA541476 22221 273 1.29 3.5217 Bacteria 2 Bacteria Bacteria 125 4.519999999999999e-31   NR MBI4662865.1 2026799 g22015 i0 62.5 5.23076923076923 80 30 87.9 0 268 29 3410 3489 MBI4662865.1 amino acid adenylation domain-containing protein [Verrucomicrobiota bacterium] diamond 1428 125 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
26824870 26824870 PRJNA541476_P_NODE_31061_length_250_cov_0.875706_g30855_i0 PRJNA541476 31061 250 0.875706 2.189265 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 49.7 1.42e-4   NR HNQ91087.1 2026799 g30855 i0 67.9 0.336 28 9 33.6 0 224 141 185 212 HNQ91087.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 84 49.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
26839857 26839857 PRJNA541476_P_NODE_34641_length_246_cov_1.734104_g34435_i0 PRJNA541476 34641 246 1.734104 4.26589584 Bacteria 2 Bacteria Bacteria 46.2 0.00225   NR MEX2381968.1 2026772 g34435 i0 57.6 2.09756097560976 33 14 40.2 0 211 113 464 496 MEX2381968.1 sulfatase-like hydrolase/transferase [Opitutales bacterium] diamond 516 46.6 0.991416309012876 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
27014532 27014532 PRJNA541476_P_NODE_25682_length_261_cov_0.968085_g25476_i0 PRJNA541476 25682 261 0.968085 2.52670185 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 119 3.68e-30   NR RYD84284.1 2026800 g25476 i0 70.6 0.977011494252874 85 25 97.7 0 259 5 137 221 RYD84284.1 MAG: hypothetical protein EOP84_05935 [Verrucomicrobiaceae bacterium] diamond 255 119 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
27172488 27172488 PRJNA541476_P_NODE_25542_length_261_cov_1.505319_g25336_i0 PRJNA541476 25542 261 1.505319 3.92888259 Cerasicoccus arenae 424488 Bacteria Bacteria 43.5 0.0244   NR WP_189512271.1 424488 g25336 i0 45.8 0.551724137931034 48 23 55.2 1 222 79 212 256 WP_189512271.1 glycosyltransferase [Cerasicoccus arenae] diamond 144 43.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Cerasicoccaceae Cerasicoccus Cerasicoccus arenae
27741597 27741597 PRJNA541476_P_NODE_40144_length_242_cov_0.917160_g39938_i0 PRJNA541476 40144 242 0.91716 2.2195272 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 48.5 3.41e-4   NR MEZ5329470.1 2026801 g39938 i0 38.6 1.73553719008264 57 35 70.7 0 187 17 401 457 MEZ5329470.1 tetratricopeptide repeat protein [Verrucomicrobiales bacterium] diamond 420 48.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28120144 28120144 PRJNA541476_P_NODE_725_length_1323_cov_4.904800_g488_i1 PRJNA541476 725 1323 4.9048 64.890504 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 290 4.81e-91   NR RYD71398.1 2026800 g488 i1 45.1 0.804988662131519 355 182 79.1 6 106 1152 14 361 RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] diamond 1065 290 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28593843 28593843 PRJNA541476_P_NODE_10687_length_351_cov_1.561151_g10481_i0 PRJNA541476 10687 351 1.561151 5.47964001 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 177 8.670000000000002e-51   NR RYD76251.1 2026800 g10481 i0 73 0.982905982905983 115 31 98.3 0 349 5 80 194 RYD76251.1 MAG: hypothetical protein EOP84_17160, partial [Verrucomicrobiaceae bacterium] diamond 345 177 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28640391 28640391 PRJNA541476_P_NODE_1707_length_907_cov_6.743405_g1550_i0 PRJNA541476 1707 907 6.743405 61.16268335 Bacteria 2 Bacteria Bacteria 258 5.25e-82   NR MEY4488007.1 2026799 g1550 i0 56.6 11.606394707828 249 103 81.7 2 821 81 11 256 MEY4488007.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 10527 260 0.992307692307692 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28688698 28688698 PRJNA541476_P_NODE_2027_length_828_cov_4.720530_g1857_i0 PRJNA541476 2027 828 4.72053 39.0859884 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 265 5.540000000000001e-85   NR MEY4488007.1 2026799 g1857 i0 57.7 5.38768115942029 246 103 88.8 1 742 8 11 256 MEY4488007.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 4461 265 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28877810 28877810 PRJNA541476_P_NODE_16248_length_301_cov_2.289474_g16042_i0 PRJNA541476 16248 301 2.289474 6.89131674 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 106 5.78e-25   NR RYD84284.1 2026800 g16042 i0 73 0.737541528239203 74 19 73.8 1 224 3 62 134 RYD84284.1 MAG: hypothetical protein EOP84_05935 [Verrucomicrobiaceae bacterium] diamond 222 106 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
29130685 29130685 PRJNA541476_P_NODE_4829_length_518_cov_4.177528_g4629_i0 PRJNA541476 4829 518 4.177528 21.63959504 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 185 2.7099999999999992e-55   NR MEY4488007.1 2026799 g4629 i0 58.8 0.984555984555985 170 70 98.5 0 516 7 84 253 MEY4488007.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 510 185 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29871673 29871673 PRJNA541476_P_NODE_10571_length_352_cov_4.286738_g10365_i0 PRJNA541476 10571 352 4.286738 15.08931776 Pseudomonadati 3379134 Bacteria Bacteria 117 2.07e-29   NR MCS7091105.1 2838792 g10365 i0 67.5 4.58522727272727 83 26 70.7 1 104 352 104 185 MCS7091105.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Limisphaera sp.] diamond 1614 117 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales Limisphaeraceae Limisphaera Limisphaera sp.
30551657 30551657 PRJNA541476_P_NODE_22573_length_271_cov_5.005051_g22367_i0 PRJNA541476 22573 271 5.005051 13.56368821 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 81.3 6.64e-17   NR RYD70704.1 2026800 g22367 i0 56.6 0.841328413284133 76 33 84.1 0 44 271 6 81 RYD70704.1 MAG: hypothetical protein EOP84_26230 [Verrucomicrobiaceae bacterium] diamond 228 81.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
30836143 30836143 PRJNA541476_P_NODE_14254_length_315_cov_1.334711_g14048_i0 PRJNA541476 14254 315 1.334711 4.20433965 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 48.5 7.88e-4   NR MEY5011675.1 2026799 g14048 i0 47.2 0.504761904761905 53 27 49.5 1 20 175 412 464 MEY5011675.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 159 48.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31120217 31120217 PRJNA541476_P_NODE_575_length_1462_cov_3.844492_g488_i0 PRJNA541476 575 1462 3.844492 56.20647304 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 287 3.16e-89   NR RYD71398.1 2026800 g488 i0 44.8 0.728454172366621 355 183 71.6 6 1357 311 14 361 RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] diamond 1065 287 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31183439 31183439 PRJNA541476_P_NODE_22755_length_271_cov_1.272727_g22549_i0 PRJNA541476 22755 271 1.272727 3.44909017 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 107 1.28e-26   NR RYD36583.1 2026800 g22549 i0 52.2 0.996309963099631 90 43 99.6 0 270 1 70 159 RYD36583.1 MAG: Mpv17/PMP22 family protein [Verrucomicrobiaceae bacterium] diamond 270 107 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
32322857 32322857 PRJNA541476_P_NODE_3039_length_670_cov_2.093802_g2848_i0 PRJNA541476 3039 670 2.093802 14.0284734 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 194 5.69e-58   NR MEY4488007.1 2026799 g2848 i0 54.1 4.07014925373134 181 82 80.6 1 665 126 76 256 MEY4488007.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 2727 194 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32480902 32480902 PRJNA541476_P_NODE_4379_length_547_cov_6.736287_g4183_i0 PRJNA541476 4379 547 6.736287 36.84748989 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 211 2.6200000000000002e-65   NR HEY2344067.1 2811408 g4183 i0 60.9 17.6654478976234 179 70 98.2 0 5 541 17 195 HEY2344067.1 glucose 1-dehydrogenase [Chthoniobacteraceae bacterium] diamond 9663 211 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;