RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA541476", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA541476 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20910492 20910492 PRJNA541476_P_NODE_16237_length_301_cov_2.600877_g16031_i0 PRJNA541476 16237 301 2.600877 7.82863977 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 77 7.01e-14   NR KAJ4460321.1 342808 g16031 i0 66.1 0.558139534883721 56 19 55.8 0 134 301 1068 1123 KAJ4460321.1 putative ABC transporter F family member 1 [Paratrimastix pyriformis] diamond 168 77 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
20910691 20910691 PRJNA541476_P_NODE_24477_length_265_cov_1.213542_g24271_i0 PRJNA541476 24477 265 1.213542 3.2158863 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 71.3 6.69e-8   NTclustered gi|2794939993|ref|XM_067879102.1| 2049356 g24271 i0 90.566 13.377358490566 53 5 20 0 201 253 2083 2135 Monocercomonoides exilis putative CLIP-associating protein 1/2 (MONOS_8672fu8673), partial mRNA blastn 3545 71.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
29334863 29334863 PRJNA541476_P_NODE_21829_length_274_cov_2.029851_g21623_i0 PRJNA541476 21829 274 2.029851 5.56179174 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 94 3.37e-20   NR XP_067729609.1 2049356 g21623 i0 52.7 5.03649635036496 91 35 98.5 2 3 272 67 150 XP_067729609.1 putative Hsp40 [Monocercomonoides exilis] diamond 1380 94.4 0.995762711864407 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
31626447 31626447 PRJNA541476_P_NODE_41736_length_228_cov_3.012903_g41530_i0 PRJNA541476 41736 228 3.012903 6.86941884 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52 1.69e-5   NR XP_067727907.1 2049356 g41530 i0 43.1 0.855263157894737 65 36 84.2 1 30 221 911 975 XP_067727907.1 uncharacterized protein MONOS_1677 [Monocercomonoides exilis] diamond 195 52 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;