RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA541476", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA541476 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6222170 6222170 PRJNA541476_P_NODE_8745_length_383_cov_2.838710_g8541_i0 PRJNA541476 8745 383 2.83871 10.8722593 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 92.4 5.54e-19   NR XP_068360135.1 1144522 g8541 i0 45.4 0.759791122715405 97 52 76 1 91 381 6 101 XP_068360135.1 fatty aldehyde dehydrogenase variant form [Tritrichomonas foetus] diamond 291 92.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31816220 31816220 PRJNA541476_P_NODE_21537_length_276_cov_0.995074_g21331_i0 PRJNA541476 21537 276 0.995074 2.74640424 Trichonympha agilis 63628 Parabasalia other_Eukaryota 106 1.69e-24   NR BAC98826.1 63628 g21331 i0 63 1 92 34 100 0 1 276 65 156 BAC98826.1 enolase [Trichonympha agilis] diamond 276 106 1 Eukaryota Metamonada   Parabasalia   Trichonymphida Trichonymphidae Trichonympha Trichonympha agilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;