RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA541476", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA541476 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8161333 8161333 PRJNA541476_P_NODE_17927_length_292_cov_1.022831_g17721_i0 PRJNA541476 17927 292 1.022831 2.98666652 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 243 1.5e-59   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g17721 i0 82.909 8.44178082191781 275 41 93 6 22 292 3681096 3681368 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 2465 243 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
10713386 10713386 PRJNA541476_P_NODE_649_length_1391_cov_11.785281_g556_i0 PRJNA541476 649 1391 11.785281 163.93325871 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 1567 0   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g556 i0 87.044 128.230050323508 1397 169 100 10 1 1391 3682228 3680838 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 178368 1567 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
23460733 23460733 PRJNA541476_P_NODE_18179_length_290_cov_6.105991_g17973_i0 PRJNA541476 18179 290 6.105991 17.7073739 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 351 2.36e-92   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g17973 i0 88.621 79.4172413793103 290 32 100 1 1 290 3679729 3680017 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 23031 351 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
30077727 30077727 PRJNA541476_P_NODE_34212_length_247_cov_0.890805_g34006_i0 PRJNA541476 34212 247 0.890805 2.20028835 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 155 2.7e-42   NR HIA51835.1 2052166 g34006 i0 95.1 0.995951417004049 82 4 99.6 0 2 247 386 467 HIA51835.1 sodium:solute symporter [Candidatus Melainabacteria bacterium] diamond 246 155 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;