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contig_metadata

20 rows where bioproject = "PRJNA541476", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 20 ✖

tax_clade 1

  • Bacteria candidate phyla · 20 ✖

bioproject 1

  • PRJNA541476 · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3060163 3060163 PRJNA541476_P_NODE_6603_length_440_cov_1.678474_g6399_i0 PRJNA541476 6603 440 1.678474 7.3852856 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 752 0   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g6399 i0 97.5 344.781818181818 440 11 100 0 1 440 1250844 1251283 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 151704 752 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
15811306 15811306 PRJNA541476_P_NODE_17413_length_294_cov_2.873303_g17207_i0 PRJNA541476 17413 294 2.873303 8.44751082 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 348 3.11e-91   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g17207 i0 88.136 24.3333333333333 295 32 100 3 1 294 1251839 1252131 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 7154 348 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
20910535 20910535 PRJNA541476_P_NODE_18057_length_291_cov_1.417431_g17851_i0 PRJNA541476 18057 291 1.417431 4.12472421 Minisyncoccota bacterium 2053589 Bacteria Bacteria 125 1.8599999999999995e-31   NR MDR3570663.1 2053589 g17851 i0 66 1.03092783505155 100 28 96.9 1 290 9 59 158 MDR3570663.1 beta-Ala-His dipeptidase [Candidatus Paceibacterota bacterium] diamond 300 125 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26697915 26697915 PRJNA541476_P_NODE_4201_length_560_cov_1.330595_g4005_i0 PRJNA541476 4201 560 1.330595 7.451332 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 47.8 0.0128   NR MCX7046093.1 2107588 g4005 i0 34.9 0.867857142857143 83 50 42.9 2 527 288 559 640 MCX7046093.1 hypothetical protein [Candidatus Sumerlaeota bacterium] diamond 486 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
26712678 26712678 PRJNA541476_P_NODE_12101_length_335_cov_1.427481_g11895_i0 PRJNA541476 12101 335 1.427481 4.78206135 Bacteria 2 Bacteria Bacteria 104 3.39e-26   NR HLD81802.1 2052139 g11895 i0 46.7 9.58208955223881 107 57 95.8 0 323 3 1 107 HLD81802.1 50S ribosomal protein L14 [Patescibacteria group bacterium] diamond 3210 104 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27898960 27898960 PRJNA541476_P_NODE_36065_length_245_cov_0.906977_g35859_i0 PRJNA541476 36065 245 0.906977 2.22209365 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 43.5 0.00467   NR MCS7316783.1 2099670 g35859 i0 70.4 0.330612244897959 27 8 33.1 0 245 165 70 96 MCS7316783.1 baseplate wedge protein 53 [Candidatus Dojkabacteria bacterium] diamond 81 43.5 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
28246247 28246247 PRJNA541476_P_NODE_3066_length_667_cov_1.898990_g2874_i0 PRJNA541476 3066 667 1.89899 12.6662633 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 153 1.44e-41   NR HKN02187.1 2785449 g2874 i0 47.3 0.845577211394303 188 80 84.6 4 1 564 124 292 HKN02187.1 alpha/beta hydrolase [Candidatus Binataceae bacterium] diamond 564 153 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
28783057 28783057 PRJNA541476_P_NODE_5907_length_466_cov_2.190840_g5705_i0 PRJNA541476 5907 466 2.19084 10.2093144 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 69.3 2.3e-10   NR HJW68814.1 2838779 g5705 i0 35.4 0.637339055793991 99 49 60.5 2 86 367 158 246 HJW68814.1 LamG-like jellyroll fold domain-containing protein [Candidatus Binatia bacterium] diamond 297 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29824983 29824983 PRJNA541476_P_NODE_14331_length_314_cov_2.709544_g14125_i0 PRJNA541476 14331 314 2.709544 8.50796816 Patescibacteria group bacterium 2052139 Bacteria Bacteria 43.9 0.00363   NR GMQ95321.1 2052139 g14125 i0 34.5 0.554140127388535 58 28 45.9 1 32 175 14 71 GMQ95321.1 MAG: hypothetical protein BMS9Abin13_434 [Patescibacteria group bacterium] diamond 174 43.9 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30836141 30836141 PRJNA541476_P_NODE_12454_length_331_cov_1.678295_g12248_i0 PRJNA541476 12454 331 1.678295 5.55515645 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79.7 1.01e-14   NR MDR3570663.1 2053589 g12248 i0 68.5 0.489425981873112 54 17 48.9 0 1 162 409 462 MDR3570663.1 beta-Ala-His dipeptidase [Candidatus Paceibacterota bacterium] diamond 162 79.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31278445 31278445 PRJNA541476_P_NODE_12755_length_328_cov_1.490196_g12549_i0 PRJNA541476 12755 328 1.490196 4.88784288 Patescibacteria group bacterium 2052139 Bacteria Bacteria 159 2.63e-43   NR MBU1126552.1 2052139 g12549 i0 69.2 0.978658536585366 107 33 97.9 0 327 7 221 327 MBU1126552.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Patescibacteria group bacterium] diamond 321 159 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31626440 31626440 PRJNA541476_P_NODE_34676_length_246_cov_1.624277_g34470_i0 PRJNA541476 34676 246 1.624277 3.99572142 Minisyncoccota bacterium 2053589 Bacteria Bacteria 75.1 2.85e-15   NR MDR3570671.1 2053589 g34470 i0 54.1 1.03658536585366 85 33 96.3 2 1 237 24 108 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 255 75.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31721375 31721375 PRJNA541476_P_NODE_26477_length_258_cov_1.362162_g26271_i0 PRJNA541476 26477 258 1.362162 3.51437796 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.0138   NR MFA7192012.1 2053589 g26271 i0 31.9 0.837209302325581 72 49 83.7 0 40 255 3 74 MFA7192012.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 216 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31862590 31862590 PRJNA541476_P_NODE_11357_length_343_cov_1.677778_g11151_i0 PRJNA541476 11357 343 1.677778 5.75477854 Bacteria 2 Bacteria Bacteria 60.5 9.05e-9   NR AKM81192.1 1619077 g11151 i0 55.8 5.16034985422741 43 19 37.6 0 130 2 13 55 AKM81192.1 MAG: 50S ribosomal protein L13, large subunit ribosomal protein L13 [candidate division TM6 bacterium GW2011_GWF2_28_16] diamond 1770 60.8 0.995065789473684 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium GW2011_GWF2_28_16
32037794 32037794 PRJNA541476_P_NODE_32618_length_248_cov_1.274286_g32412_i0 PRJNA541476 32618 248 1.274286 3.16022928 Candidatus Firestoneibacteriota bacterium 2715505 Bacteria Bacteria 42.7 0.0401   NR MBI5207974.1 2715505 g32412 i0 36.7 0.592741935483871 49 31 59.3 0 176 30 675 723 MBI5207974.1 tetratricopeptide repeat protein [Candidatus Firestonebacteria bacterium] diamond 147 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Firestoneibacteriota         Candidatus Firestoneibacteriota bacterium
32195997 32195997 PRJNA541476_P_NODE_2818_length_701_cov_6.558917_g2627_i0 PRJNA541476 2818 701 6.558917 45.97800817 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 138 6.5499999999999995e-37   NR MCT4592035.1 2044595 g2627 i0 42.1 0.680456490727532 159 89 68 2 588 112 4 159 MCT4592035.1 NAD(P)H-dependent oxidoreductase [Candidatus Altimarinota bacterium] diamond 477 138 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32210897 32210897 PRJNA541476_P_NODE_18758_length_288_cov_1.390698_g18552_i0 PRJNA541476 18758 288 1.390698 4.00521024 Bacteria 2 Bacteria Bacteria 50.4 1.31e-4   NR HTY44297.1 2052139 g18552 i0 63.3 0.9375 30 10 30.2 1 196 282 491 520 HTY44297.1 C1 family peptidase [Patescibacteria group bacterium] diamond 270 50.8 0.992125984251969 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32322836 32322836 PRJNA541476_P_NODE_10279_length_356_cov_1.908127_g10073_i0 PRJNA541476 10279 356 1.908127 6.79293212 Patescibacteria group bacterium 2052139 Bacteria Bacteria 99.4 2.3399999999999994e-23   NR MCL4419857.1 2052139 g10073 i0 55.7 0.741573033707865 88 39 74.2 0 90 353 55 142 MCL4419857.1 KTI12 family protein [Patescibacteria group bacterium] diamond 264 99.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32322855 32322855 PRJNA541476_P_NODE_28719_length_252_cov_1.128492_g28513_i0 PRJNA541476 28719 252 1.128492 2.84379984 candidate division WWE3 bacterium GW2 422282 Bacteria Bacteria 42.4 0.0279   NR KKS21261.1 1619103 g28513 i0 28.8 0.952380952380952 80 57 95.2 0 245 6 54 133 KKS21261.1 MAG: hypothetical protein UU80_C0032G0025 [candidate division WWE3 bacterium GW2011_GWA1_41_8] diamond 240 42.4 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium GW2011_GWA1_41_8
32795760 32795760 PRJNA541476_P_NODE_4620_length_530_cov_4.032823_g4421_i0 PRJNA541476 4620 530 4.032823 21.3739619 Patescibacteria group bacterium 2052139 Bacteria Bacteria 281 3.690000000000001e-91   NR MCL4419852.1 2052139 g4421 i0 81.8 0.962264150943396 170 31 96.2 0 3 512 232 401 MCL4419852.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase [Patescibacteria group bacterium] diamond 510 281 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;