RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA541476", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA541476 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20910535 20910535 PRJNA541476_P_NODE_18057_length_291_cov_1.417431_g17851_i0 PRJNA541476 18057 291 1.417431 4.12472421 Minisyncoccota bacterium 2053589 Bacteria Bacteria 125 1.8599999999999995e-31   NR MDR3570663.1 2053589 g17851 i0 66 1.03092783505155 100 28 96.9 1 290 9 59 158 MDR3570663.1 beta-Ala-His dipeptidase [Candidatus Paceibacterota bacterium] diamond 300 125 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30836141 30836141 PRJNA541476_P_NODE_12454_length_331_cov_1.678295_g12248_i0 PRJNA541476 12454 331 1.678295 5.55515645 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79.7 1.01e-14   NR MDR3570663.1 2053589 g12248 i0 68.5 0.489425981873112 54 17 48.9 0 1 162 409 462 MDR3570663.1 beta-Ala-His dipeptidase [Candidatus Paceibacterota bacterium] diamond 162 79.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31626440 31626440 PRJNA541476_P_NODE_34676_length_246_cov_1.624277_g34470_i0 PRJNA541476 34676 246 1.624277 3.99572142 Minisyncoccota bacterium 2053589 Bacteria Bacteria 75.1 2.85e-15   NR MDR3570671.1 2053589 g34470 i0 54.1 1.03658536585366 85 33 96.3 2 1 237 24 108 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 255 75.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31721375 31721375 PRJNA541476_P_NODE_26477_length_258_cov_1.362162_g26271_i0 PRJNA541476 26477 258 1.362162 3.51437796 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.0138   NR MFA7192012.1 2053589 g26271 i0 31.9 0.837209302325581 72 49 83.7 0 40 255 3 74 MFA7192012.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 216 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;