RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA541476", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA541476 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28246247 28246247 PRJNA541476_P_NODE_3066_length_667_cov_1.898990_g2874_i0 PRJNA541476 3066 667 1.89899 12.6662633 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 153 1.44e-41   NR HKN02187.1 2785449 g2874 i0 47.3 0.845577211394303 188 80 84.6 4 1 564 124 292 HKN02187.1 alpha/beta hydrolase [Candidatus Binataceae bacterium] diamond 564 153 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
28783057 28783057 PRJNA541476_P_NODE_5907_length_466_cov_2.190840_g5705_i0 PRJNA541476 5907 466 2.19084 10.2093144 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 69.3 2.3e-10   NR HJW68814.1 2838779 g5705 i0 35.4 0.637339055793991 99 49 60.5 2 86 367 158 246 HJW68814.1 LamG-like jellyroll fold domain-containing protein [Candidatus Binatia bacterium] diamond 297 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;