RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA540466", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA540466 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29288231 29288231 PRJNA540466_S_NODE_41729_length_285_cov_1.103774_g41180_i0 PRJNA540466 41729 285 1.103774 3.1457559 Candidatus Nitrosocaldaceae archaeon 2838776 Archaea Archaea 61.6 1.37e-8   NR GIU70885.1 2838776 g41180 i0 55.3 0.494736842105263 47 21 49.5 0 284 144 194 240 GIU70885.1 MAG: hypothetical protein KatS3mg003_0364 [Candidatus Nitrosocaldaceae archaeon] diamond 141 61.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Candidatus Nitrosocaldales Candidatus Nitrosocaldaceae   Candidatus Nitrosocaldaceae archaeon
31341831 31341831 PRJNA540466_S_NODE_50216_length_264_cov_1.062827_g49667_i0 PRJNA540466 50216 264 1.062827 2.80586328 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 83.6 7.55e-17   NR HEX6294714.1 2169593 g49667 i0 58.2 0.761363636363636 67 27 75 1 263 66 52 118 HEX6294714.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 201 83.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;