RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA540466" and tax_phylum = "Lenarviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA540466 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4335069 4335069 PRJNA540466_S_NODE_46784_length_271_cov_3.080808_g46235_i0 PRJNA540466 46784 271 3.080808 8.34898968 Grapevine wood holobiome associated narna-like virus 14 3398650 Viruses Viruses 56.5 0.002   NTclustered gi|2905035843|gb|PV021997.1| 3398650 g46235 i0 100 0.11070110701107 30 0 11 0 7 36 2110 2081 Grapevine wood holobiome associated narna-like virus 14 isolate grp14 segment RNA2 RdRp gene, complete cds blastn 30 56.5 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 14
5611842 5611842 PRJNA540466_S_NODE_39565_length_291_cov_3.500000_g39016_i0 PRJNA540466 39565 291 3.5 10.185 Mitovirus sp. 2587224 Viruses Viruses 119 2.62e-22   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g39016 i0 93.671 0.271477663230241 79 5 27 0 56 134 33 111 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 79 119 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
9436233 9436233 PRJNA540466_S_NODE_25808_length_351_cov_5.280576_g25259_i0 PRJNA540466 25808 351 5.280576 18.53482176 Mitovirus sp. 2587224 Viruses Viruses 174 6.78e-39   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g25259 i0 94.643 2.75498575498575 112 6 32 0 200 311 112 1 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 967 174 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
32147610 32147610 PRJNA540466_S_NODE_32058_length_319_cov_1.735772_g31509_i0 PRJNA540466 32058 319 1.735772 5.53711268 Narnavirus 186767 Viruses Viruses 70.5 1.68e-11   NR WAK75248.1 2583949 g31509 i0 51.5 4.76802507836991 66 32 62.1 0 265 68 14 79 WAK75248.1 MAG: RNA-dependent RNA polymerase [Narnaviridae sp.] diamond 1521 71.2 0.990168539325843 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Narnaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;