RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA540466" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA540466 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7496589 7496589 PRJNA540466_S_NODE_50646_length_263_cov_1.210526_g50097_i0 PRJNA540466 50646 263 1.210526 3.18368338 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 148 1.73e-44   NR MCX7689033.1 2682145 g50097 i0 97.6 0.946768060836502 83 2 94.7 0 262 14 8 90 MCX7689033.1 hypothetical protein [Fimbriimonadales bacterium] diamond 249 148 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
31689631 31689631 PRJNA540466_S_NODE_35257_length_306_cov_2.248927_g34708_i0 PRJNA540466 35257 306 2.248927 6.88171662 Armatimonadetes bacterium CG_4_1 2033014 Bacteria Bacteria 153 2e-41   NR PIY44557.1 1973909 g34708 i0 98.8 0.833333333333333 85 1 83.3 0 288 34 134 218 PIY44557.1 MAG: hypothetical protein COZ05_07900 [Armatimonadetes bacterium CG_4_10_14_3_um_filter_59_10] diamond 255 153 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium CG_4_10_14_3_um_filter_59_10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;