RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA540466", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 5 ✖

tax_kingdom 1

  • Fungi · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA540466 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28688687 28688687 PRJNA540466_S_NODE_747_length_1096_cov_6.039101_g635_i0 PRJNA540466 747 1096 6.039101 66.18854696 Rozella allomycis CSF55 988480 Fungi Fungi 127 2e-29   NR EPZ33730.1 988480 g635 i0 34.5 1.4014598540146 252 146 67.3 7 1066 329 120 358 EPZ33730.1 Choline/ethanolamine kinase domain-containing protein [Rozella allomycis CSF55] diamond 1536 127 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29446031 29446031 PRJNA540466_S_NODE_25850_length_351_cov_2.769784_g25301_i0 PRJNA540466 25850 351 2.769784 9.72194184 Rozella allomycis CSF55 988480 Fungi Fungi 88.2 1.18e-17   NR RKP19556.1 988480 g25301 i0 50 2.4017094017094 94 45 78.6 2 31 306 323 416 RKP19556.1 WD40 repeat-like protein [Rozella allomycis CSF55] diamond 843 88.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32227723 32227723 PRJNA540466_S_NODE_37718_length_297_cov_3.607143_g37169_i0 PRJNA540466 37718 297 3.607143 10.71321471 Rozella allomycis CSF55 988480 Fungi Fungi 83.2 7.59e-17   NR EPZ34692.1 988480 g37169 i0 66.2 3.17171717171717 65 21 64.6 1 243 52 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 83.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32795694 32795694 PRJNA540466_S_NODE_14920_length_452_cov_2.021108_g14373_i0 PRJNA540466 14920 452 2.021108 9.13540816 Rozella allomycis CSF55 988480 Fungi Fungi 73.9 1.52e-12   NR RKP17457.1 988480 g14373 i0 36.8 0.70353982300885 106 64 69 2 438 127 31 135 RKP17457.1 hypothetical protein ROZALSC1DRAFT_30735 [Rozella allomycis CSF55] diamond 318 73.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32873716 32873716 PRJNA540466_S_NODE_36880_length_300_cov_3.193833_g36331_i0 PRJNA540466 36880 300 3.193833 9.581499 Eukaryota 2759 Fungi Fungi 84.3 2.76e-17   NR EPZ34692.1 988480 g36331 i0 66.7 1.86 63 19 61 1 299 117 192 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 558 84.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;