contig_metadata
14 rows where bioproject = "PRJNA540466", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3058808 | 3058808 | PRJNA540466_S_NODE_22063_length_378_cov_2.150820_g21514_i0 | PRJNA540466 | 22063 | 378 | 2.15082 | 8.1300996 | Phaeodactylum tricornutum | 2850 | SAR_Eukaryotes | SAR_Eukaryotes | 302 | 3.24e-77 | NTclustered | gi|657012465|gb|KF302574.1| | 2850 | g21514 | i0 | 90.086 | 1.7962962962963 | 232 | 23 | 61 | 0 | 14 | 245 | 113 | 344 | Phaeodactylum tricornutum clone C567 ribosomal protein mRNA, partial cds | blastn | 679 | 302 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Phaeodactylaceae | Phaeodactylum | Phaeodactylum tricornutum | ||
| 10711887 | 10711887 | PRJNA540466_S_NODE_13809_length_467_cov_4.078680_g13264_i0 | PRJNA540466 | 13809 | 467 | 4.07868 | 19.0474356 | Bacillariophyta | 2836 | SAR_Eukaryotes | SAR_Eukaryotes | 220 | 1.4499999999999998e-68 | NR | AAX09600.1 | 29204 | g13264 | i0 | 89.7 | 2.3576017130621 | 117 | 12 | 75.2 | 0 | 466 | 116 | 213 | 329 | AAX09600.1 elongation factor 1 alpha, partial [Cyclotella cryptica] | diamond | 1101 | 220 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Stephanodiscales | Stephanodiscaceae | Cyclotella | Cyclotella cryptica | ||
| 17696411 | 17696411 | PRJNA540466_S_NODE_52014_length_260_cov_1.529412_g51465_i0 | PRJNA540466 | 52014 | 260 | 1.529412 | 3.9764712 | root | 1 | Root_unresolved | Root_unresolved | 91.6 | 5.02e-14 | NTclustered | gi|2074156200|gb|MW413905.1| | 216802 | g51465 | i0 | 90 | 24.7615384615385 | 70 | 7 | 27 | 0 | 117 | 186 | 24609 | 24540 | Guinardia delicatula mitochondrion, complete genome | blastn | 6438 | 91.6 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Rhizosoleniales | Rhizosoleniaceae | Guinardia | Guinardia delicatula | ||
| 18359777 | 18359777 | PRJNA540466_S_NODE_64055_length_240_cov_4.604790_g63506_i0 | PRJNA540466 | 64055 | 240 | 4.60479 | 11.051496 | root | 1 | Root_unresolved | Root_unresolved | 68.9 | 2.11e-11 | NR | YP_010131923.1 | 1335017 | g63506 | i0 | 53.8 | 9.725 | 65 | 30 | 81.3 | 0 | 16 | 210 | 53 | 117 | YP_010131923.1 NADH dehydrogenase subunit 4 [Odontella regia] | diamond | 2334 | 69.3 | 0.994227994227994 | Eukaryota | Sar | Bacillariophyta | Mediophyceae | Eupodiscales | Parodontellaceae | Trieres | Trieres regia | ||
| 27124004 | 27124004 | PRJNA540466_S_NODE_17422_length_421_cov_5.439655_g16873_i0 | PRJNA540466 | 17422 | 421 | 5.439655 | 22.90094755 | Bacillariophyta | 2836 | SAR_Eukaryotes | SAR_Eukaryotes | 107 | 1.03e-25 | NR | KAL3786048.1 | 29204 | g16873 | i0 | 66.2 | 7.67458432304038 | 74 | 25 | 52.7 | 0 | 2 | 223 | 158 | 231 | KAL3786048.1 hypothetical protein HJC23_003896 [Cyclotella cryptica] | diamond | 3231 | 107 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Stephanodiscales | Stephanodiscaceae | Cyclotella | Cyclotella cryptica | ||
| 28513903 | 28513903 | PRJNA540466_S_NODE_26547_length_347_cov_1.405109_g25998_i0 | PRJNA540466 | 26547 | 347 | 1.405109 | 4.87572823 | Bacillariophyceae | 33849 | SAR_Eukaryotes | SAR_Eukaryotes | 53.9 | 1.5e-5 | NR | KAG7352108.1 | 303405 | g25998 | i0 | 50 | 1.14121037463977 | 44 | 22 | 38 | 0 | 5 | 136 | 866 | 909 | KAG7352108.1 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Nitzschia inconspicua] | diamond | 396 | 54.3 | 0.992633517495396 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Nitzschia | Nitzschia inconspicua | ||
| 28657003 | 28657003 | PRJNA540466_S_NODE_35307_length_306_cov_1.669528_g34758_i0 | PRJNA540466 | 35307 | 306 | 1.669528 | 5.10875568 | Fragilariopsis cylindrus CCMP11 | 186039 | SAR_Eukaryotes | SAR_Eukaryotes | 63.2 | 6.07e-10 | NR | OEU18810.1 | 635003 | g34758 | i0 | 46.2 | 0.764705882352941 | 78 | 37 | 72.5 | 2 | 290 | 69 | 63 | 139 | OEU18810.1 hypothetical protein FRACYDRAFT_237091 [Fragilariopsis cylindrus CCMP1102] | diamond | 234 | 63.2 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Fragilariopsis | Fragilariopsis cylindrus | ||
| 29618608 | 29618608 | PRJNA540466_S_NODE_70510_length_212_cov_4.309353_g69961_i0 | PRJNA540466 | 70510 | 212 | 4.309353 | 9.13582836 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 76.3 | 3.83e-14 | NR | CAJ1946837.1 | 2856 | g69961 | i0 | 83.8 | 7.5 | 37 | 6 | 52.4 | 0 | 189 | 79 | 183 | 219 | CAJ1946837.1 unnamed protein product [Cylindrotheca closterium] | diamond | 1590 | 77 | 0.990909090909091 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Cylindrotheca | Cylindrotheca closterium | ||
| 30299425 | 30299425 | PRJNA540466_S_NODE_62532_length_243_cov_1.605882_g61983_i0 | PRJNA540466 | 62532 | 243 | 1.605882 | 3.90229326 | Nitzschia inconspicua | 303405 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 2.78e-6 | NR | KAG7362121.1 | 303405 | g61983 | i0 | 57.1 | 0.975308641975309 | 42 | 18 | 51.9 | 0 | 151 | 26 | 6 | 47 | KAG7362121.1 hypothetical protein IV203_025787 [Nitzschia inconspicua] | diamond | 237 | 52.8 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Nitzschia | Nitzschia inconspicua | ||
| 31009005 | 31009005 | PRJNA540466_S_NODE_39434_length_292_cov_1.369863_g38885_i0 | PRJNA540466 | 39434 | 292 | 1.369863 | 3.99999996 | root | 1 | Root_unresolved | Root_unresolved | 52.4 | 2.8e-5 | NR | CAB9515627.1 | 568900 | g38885 | i0 | 66.7 | 3.35958904109589 | 33 | 11 | 33.9 | 0 | 1 | 99 | 509 | 541 | CAB9515627.1 Hybrid signal transduction histidine kinase [Seminavis robusta] | diamond | 981 | 52.8 | 0.992424242424242 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Naviculaceae | Seminavis | Seminavis robusta | ||
| 31293380 | 31293380 | PRJNA540466_S_NODE_55195_length_254_cov_1.270718_g54646_i0 | PRJNA540466 | 55195 | 254 | 1.270718 | 3.22762372 | Bacillariophyta | 2836 | SAR_Eukaryotes | SAR_Eukaryotes | 90.1 | 8.47e-19 | NR | XP_002177350.1 | 556484 | g54646 | i0 | 72.4 | 2.06692913385827 | 58 | 16 | 68.5 | 0 | 231 | 58 | 465 | 522 | XP_002177350.1 glutamate-trna ligase [Phaeodactylum tricornutum CCAP 1055/1] | diamond | 525 | 90.1 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Phaeodactylaceae | Phaeodactylum | Phaeodactylum tricornutum | ||
| 31799335 | 31799335 | PRJNA540466_S_NODE_25377_length_354_cov_5.053381_g24828_i0 | PRJNA540466 | 25377 | 354 | 5.053381 | 17.88896874 | Bacillariophyceae | 33849 | SAR_Eukaryotes | SAR_Eukaryotes | 86.3 | 2.68e-17 | NR | KAG7361485.1 | 303405 | g24828 | i0 | 42.2 | 4.15254237288136 | 83 | 48 | 70.3 | 0 | 353 | 105 | 246 | 328 | KAG7361485.1 GDP-L-fucose synthase [Nitzschia inconspicua] | diamond | 1470 | 86.3 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Nitzschia | Nitzschia inconspicua | ||
| 32322833 | 32322833 | PRJNA540466_S_NODE_71119_length_207_cov_4.082090_g70570_i0 | PRJNA540466 | 71119 | 207 | 4.08209 | 8.4499263 | Chaetoceros tenuissimus | 426638 | SAR_Eukaryotes | SAR_Eukaryotes | 60.5 | 1.29e-8 | NR | GFH58819.1 | 426638 | g70570 | i0 | 63.8 | 0.681159420289855 | 47 | 15 | 65.2 | 1 | 203 | 69 | 950 | 996 | GFH58819.1 hypothetical protein CTEN210_15295 [Chaetoceros tenuissimus] | diamond | 141 | 60.5 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Chaetocerotales | Chaetocerotaceae | Chaetoceros | Chaetoceros tenuissimus | ||
| 32842202 | 32842202 | PRJNA540466_S_NODE_21960_length_379_cov_1.408497_g21411_i0 | PRJNA540466 | 21960 | 379 | 1.408497 | 5.33820363 | Bacillariophyta | 2836 | SAR_Eukaryotes | SAR_Eukaryotes | 73.2 | 5.43e-13 | NR | XP_002178545.1 | 556484 | g21411 | i0 | 33.6 | 1.79683377308707 | 116 | 70 | 87.9 | 3 | 378 | 46 | 88 | 201 | XP_002178545.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1] | diamond | 681 | 73.2 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Phaeodactylaceae | Phaeodactylum | Phaeodactylum tricornutum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;