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contig_metadata

24 rows where bioproject = "PRJNA540466", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 24 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 24 ✖

bioproject 1

  • PRJNA540466 · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1783403 1783403 PRJNA540466_S_NODE_33022_length_315_cov_1.913223_g32473_i0 PRJNA540466 33022 315 1.913223 6.02665245 PVC group 1783257 Bacteria Bacteria 162 7.55e-44   NR MAT15335.1 37635 g32473 i0 90.8 46.0666666666667 87 8 82.9 0 289 29 197 283 MAT15335.1 aconitate hydratase AcnA [Planctomyces sp.] diamond 14511 162 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp.
3059003 3059003 PRJNA540466_S_NODE_42963_length_281_cov_2.884615_g42414_i0 PRJNA540466 42963 281 2.884615 8.10576815 Urbifossiella limnaea 2528023 Bacteria Bacteria 350 8.2e-92   NTclustered gi|1712585314|gb|CP036273.1| 2528023 g42414 i0 91.085 112.800711743772 258 23 92 0 1 258 2019860 2019603 Urbifossiella limnaea strain ETA_A1 chromosome, complete genome blastn 31697 350 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Urbifossiella Urbifossiella limnaea
6885527 6885527 PRJNA540466_S_NODE_18606_length_409_cov_2.062500_g18057_i0 PRJNA540466 18606 409 2.0625 8.435625 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 483 1.18e-131   NTclustered gi|2874253853|emb|OY969909.1| 1914239 g18057 i0 89.61 78.0953545232274 385 33 93 6 30 409 2003145 2002763 MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 blastn 31941 483 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
8161103 8161103 PRJNA540466_S_NODE_68187_length_228_cov_3.993548_g67638_i0 PRJNA540466 68187 228 3.993548 9.10528944 uncultured Planctomycetota bacterium 120965 Bacteria Bacteria 377 2.95e-100   NTclustered gi|262410150|gb|GU074326.1| 120965 g67638 i0 99.519 92.4210526315789 208 0 91 1 22 228 50 257 Uncultured planctomycete clone 2S49 16S ribosomal RNA gene, partial sequence blastn 21072 377 1 Bacteria PVC group Pseudomonadati Planctomycetota         uncultured Planctomycetota bacterium
10712333 10712333 PRJNA540466_S_NODE_59609_length_247_cov_1.339080_g59060_i0 PRJNA540466 59609 247 1.33908 3.3075276 Rhodopirellula baltica 265606 Bacteria Bacteria 60.2 1.33e-4   NTclustered gi|32445988|emb|BX294148.1| 243090 g59060 i0 100 8.33603238866397 32 0 13 0 151 182 35552 35583 Rhodopirellula baltica SH 1 complete genome; segment 16/24 blastn 2059 60.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Rhodopirellula Rhodopirellula baltica
18359682 18359682 PRJNA540466_S_NODE_53435_length_257_cov_2.070652_g52886_i0 PRJNA540466 53435 257 2.070652 5.32157564 Maioricimonas rarisocia 2528026 Bacteria Bacteria 248 2.78e-61   NTclustered gi|1712603021|gb|CP036275.1| 2528026 g52886 i0 90.052 80.6070038910506 191 19 74 0 31 221 1845629 1845439 Maioricimonas rarisocia strain Mal4 chromosome, complete genome blastn 20716 248 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Maioricimonas Maioricimonas rarisocia
20909996 20909996 PRJNA540466_S_NODE_28137_length_338_cov_1.520755_g27588_i0 PRJNA540466 28137 338 1.520755 5.1401519 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 392 1.66e-104   NTclustered gi|2874253853|emb|OY969909.1| 1914239 g27588 i0 89.423 157.470414201183 312 32 92 1 12 322 2002575 2002886 MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 blastn 53225 392 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
27457252 27457252 PRJNA540466_S_NODE_50143_length_264_cov_1.366492_g49594_i0 PRJNA540466 50143 264 1.366492 3.60753888 Planctomyces sp. SH-PL62 1636152 Bacteria Bacteria 42.7 0.0495   NR WP_068409703.1 1636152 g49594 i0 36.7 0.681818181818182 60 34 68.2 1 19 198 161 216 WP_068409703.1 BatA domain-containing protein [Planctomyces sp. SH-PL62] diamond 180 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp. SH-PL62
29035967 29035967 PRJNA540466_S_NODE_55168_length_254_cov_1.276243_g54619_i0 PRJNA540466 55168 254 1.276243 3.24165722 Novipirellula aureliae 2527966 Bacteria Bacteria 42.7 0.0369   NR TWU33679.1 2527966 g54619 i0 38.9 0.637795275590551 54 29 63.8 2 237 76 184 233 TWU33679.1 hypothetical protein Q31b_57360 [Novipirellula aureliae] diamond 162 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Novipirellula Novipirellula aureliae
29240137 29240137 PRJNA540466_S_NODE_60589_length_246_cov_0.890173_g60040_i0 PRJNA540466 60589 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 52 3.92e-6   NR MCA8910227.1 2026780 g60040 i0 55.3 2.75609756097561 38 17 46.3 0 243 130 82 119 MCA8910227.1 DUF1669 domain-containing protein [Planctomycetota bacterium] diamond 678 52.4 0.99236641221374 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29477481 29477481 PRJNA540466_S_NODE_22790_length_372_cov_5.438127_g22241_i0 PRJNA540466 22790 372 5.438127 20.22983244 Planctomycetota bacterium 2026780 Bacteria Bacteria 44.7 0.0328   NR MCH7632471.1 2026780 g22241 i0 29.6 0.57258064516129 71 50 57.3 0 119 331 309 379 MCH7632471.1 hypothetical protein [Planctomycetota bacterium] diamond 213 44.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29477482 29477482 PRJNA540466_S_NODE_24690_length_359_cov_1.062937_g24141_i0 PRJNA540466 24690 359 1.062937 3.81594383 Gemmataceae bacterium 2052164 Bacteria Bacteria 45.8 0.00599   NR MBX9581723.1 2052164 g24141 i0 46.8 1.30362116991643 77 36 61 3 19 237 107 182 MBX9581723.1 disulfide bond formation protein B [Gemmataceae bacterium] diamond 468 45.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
29824969 29824969 PRJNA540466_S_NODE_49131_length_266_cov_1.787565_g48582_i0 PRJNA540466 49131 266 1.787565 4.7549229 Gemmataceae bacterium 2052164 Bacteria Bacteria 45.8 0.00378   NR MFM7149898.1 2052164 g48582 i0 54.5 0.37218045112782 33 15 37.2 0 222 124 271 303 MFM7149898.1 EF-hand domain-containing protein [Gemmataceae bacterium] diamond 99 45.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
29824974 29824974 PRJNA540466_S_NODE_67211_length_231_cov_2.329114_g66662_i0 PRJNA540466 67211 231 2.329114 5.38025334 Pirellula sp. 117 Bacteria Bacteria 70.1 4.33e-13   NR HUP81692.1 117 g66662 i0 66.7 0.584415584415584 45 15 58.4 0 97 231 1 45 HUP81692.1 CsbD family protein [Pirellula sp.] diamond 135 70.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Pirellula Pirellula sp.
29951481 29951481 PRJNA540466_S_NODE_32751_length_316_cov_2.181070_g32202_i0 PRJNA540466 32751 316 2.18107 6.8921812 Planctomycetota bacterium 2026780 Bacteria Bacteria 85.5 6.02e-17   NR MEM9643452.1 2026780 g32202 i0 44.6 0.787974683544304 83 46 78.8 0 291 43 319 401 MEM9643452.1 nucleoside monophosphate kinase [Planctomycetota bacterium] diamond 249 85.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29983078 29983078 PRJNA540466_S_NODE_43771_length_279_cov_2.160194_g43222_i0 PRJNA540466 43771 279 2.160194 6.02694126 Gemmataceae bacterium 2052164 Bacteria Bacteria 47 1.19e-4   NR MBY0513755.1 2052164 g43222 i0 58.1 1.45161290322581 43 17 45.2 1 227 102 1 43 MBY0513755.1 hypothetical protein [Gemmataceae bacterium] diamond 405 47 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
30014725 30014725 PRJNA540466_S_NODE_36611_length_301_cov_2.973684_g36062_i0 PRJNA540466 36611 301 2.973684 8.95078884 Lacipirellula limnantheis 2528024 Bacteria Bacteria 177 4.9e-54   NR WP_145431844.1 2528024 g36062 i0 91.6 1.8936877076412 95 8 94.7 0 17 301 68 162 WP_145431844.1 DedA family protein [Lacipirellula limnantheis] diamond 570 177 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Lacipirellulaceae Lacipirellula Lacipirellula limnantheis
30773080 30773080 PRJNA540466_S_NODE_40694_length_288_cov_1.223256_g40145_i0 PRJNA540466 40694 288 1.223256 3.52297728 Planctomycetota bacterium 2026780 Bacteria Bacteria 60.5 1.19e-8   NR MBI3831542.1 2026780 g40145 i0 43.6 3.375 78 39 76 1 41 259 107 184 MBI3831542.1 PH domain-containing protein [Planctomycetota bacterium] diamond 972 60.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31767817 31767817 PRJNA540466_S_NODE_41657_length_285_cov_1.731132_g41108_i0 PRJNA540466 41657 285 1.731132 4.9337262 Pseudomonadati 3379134 Bacteria Bacteria 62.4 7.16e-9   NR MCU0727425.1 2026780 g41108 i0 47 3.8 66 30 69.5 1 22 219 100 160 MCU0727425.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Planctomycetota bacterium] diamond 1083 62.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32132787 32132787 PRJNA540466_S_NODE_54438_length_255_cov_2.137363_g53889_i0 PRJNA540466 54438 255 2.137363 5.45027565 Pirellulaceae bacterium 2699754 Bacteria Bacteria 48.1 5.1e-4   NR HEV7280295.1 2699754 g53889 i0 53.1 0.376470588235294 32 15 37.6 0 251 156 317 348 HEV7280295.1 cyclopropane-fatty-acyl-phospholipid synthase family protein [Pirellulaceae bacterium] diamond 96 48.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
32495745 32495745 PRJNA540466_S_NODE_28539_length_336_cov_1.186312_g27990_i0 PRJNA540466 28539 336 1.186312 3.98600832 Pseudomonadati 3379134 Bacteria Bacteria 103 1.69e-25   NR HKB02725.1 2052164 g27990 i0 50 4.75 108 51 96.4 2 3 326 24 128 HKB02725.1 CBS domain-containing protein [Gemmataceae bacterium] diamond 1596 103 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
32575781 32575781 PRJNA540466_S_NODE_42319_length_283_cov_1.857143_g41770_i0 PRJNA540466 42319 283 1.857143 5.25571469 Planctomycetota bacterium 2026780 Bacteria Bacteria 48.1 6.51e-4   NR MBI5863225.1 2026780 g41770 i0 44.2 0.858657243816254 52 28 55.1 1 279 124 190 240 MBI5863225.1 lipase family protein [Planctomycetota bacterium] diamond 243 48.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32653096 32653096 PRJNA540466_S_NODE_61760_length_244_cov_1.701754_g61211_i0 PRJNA540466 61760 244 1.701754 4.15227976 PVC group 1783257 Bacteria Bacteria 50.8 3.21e-5   NR MEE2639803.1 2026780 g61211 i0 45.1 3.11065573770492 51 28 62.7 0 2 154 143 193 MEE2639803.1 DUF1990 domain-containing protein [Planctomycetota bacterium] diamond 759 50.8 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32733158 32733158 PRJNA540466_S_NODE_59860_length_247_cov_0.885057_g59311_i0 PRJNA540466 59860 247 0.885057 2.18609079 Mariniblastus sp. 2005381 Bacteria Bacteria 90.9 9.8e-22   NR MCH2177586.1 2005381 g59311 i0 72.5 0.619433198380567 51 14 61.9 0 182 30 42 92 MCH2177586.1 DUF427 domain-containing protein [Mariniblastus sp.] diamond 153 90.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Mariniblastus Mariniblastus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;