RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA540466", tax_clade = "Opisthokonta" and tax_phylum = "Entoprocta"

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tax_superkingdom 1

tax_phylum 1

  • Entoprocta · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA540466 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5611928 5611928 PRJNA540466_S_NODE_48545_length_267_cov_2.814433_g47996_i0 PRJNA540466 48545 267 2.814433 7.51453611 Barentsia elongata 478378 Entoprocta other_Eukaryota 111 3.97e-20   NTclustered gi|159145741|gb|EU116913.1| 478378 g47996 i0 82.54 2.1123595505618 126 22 47 0 2 127 43 168 Barentsia elongata putative ribosomal protein L39 mRNA, complete cds blastn 564 111 1 Eukaryota Opisthokonta Metazoa Entoprocta     Barentsiidae Barentsia Barentsia elongata
24733958 24733958 PRJNA540466_S_NODE_3340_length_751_cov_26.358407_g3003_i0 PRJNA540466 3340 751 26.358407 197.95163657 Barentsia elongata 478378 Entoprocta other_Eukaryota 320 1.87e-82   NTclustered gi|159145761|gb|EU116923.1| 478378 g3003 i0 79.646 31.4007989347537 452 86 60 6 269 717 458 10 Barentsia elongata putative ribosomal protein S13 mRNA, complete cds blastn 23582 320 1 Eukaryota Opisthokonta Metazoa Entoprocta     Barentsiidae Barentsia Barentsia elongata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;