RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA540466", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 6 ✖

tax_clade 1

  • Metamonada · 6 ✖

bioproject 1

  • PRJNA540466 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
508299 508299 PRJNA540466_S_NODE_60081_length_246_cov_2.716763_g59532_i0 PRJNA540466 60081 246 2.716763 6.68323698 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.022   NTclustered gi|2794932944|ref|XM_067876217.1| 2049356 g59532 i0 100 0.113821138211382 28 0 11 0 170 197 2188 2161 Monocercomonoides exilis 3',5'-cyclic-AMP phosphodiesterase (MONOS_6019), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
27109239 27109239 PRJNA540466_S_NODE_12942_length_480_cov_3.842752_g12398_i0 PRJNA540466 12942 480 3.842752 18.4452096 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 60.8 1.65e-7   NR KAJ4453645.1 342808 g12398 i0 36.7 0.49375 79 50 49.4 0 480 244 100 178 KAJ4453645.1 hypothetical protein PAPYR_11832 [Paratrimastix pyriformis] diamond 237 60.8 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27425738 27425738 PRJNA540466_S_NODE_51483_length_261_cov_1.659574_g50934_i0 PRJNA540466 51483 261 1.659574 4.33148814 Streblomastix strix 222440 Preaxostyla other_Eukaryota 142 7.22e-42   NR KAA6384362.1 222440 g50934 i0 74.4 1.88505747126437 82 21 94.3 0 14 259 11 92 KAA6384362.1 MAG: putative FKBP-type peptidyl-prolyl cis-trans isomerase [Streblomastix strix] diamond 492 142 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
29555689 29555689 PRJNA540466_S_NODE_36010_length_303_cov_3.873913_g35461_i0 PRJNA540466 36010 303 3.873913 11.73795639 Oxymonadida 66288 Preaxostyla other_Eukaryota 123 2.88e-33   NR KAA6388004.1 222440 g35461 i0 62.8 1.7029702970297 86 32 85.1 0 302 45 82 167 KAA6388004.1 MAG: putative Translationally-controlled tumor protein [Streblomastix strix] diamond 516 123 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
31405207 31405207 PRJNA540466_S_NODE_49576_length_265_cov_1.973958_g49027_i0 PRJNA540466 49576 265 1.973958 5.2309887 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 63.9 7.95e-10   NR XP_067733485.1 2049356 g49027 i0 53.7 1.24528301886792 54 25 61.1 0 99 260 61 114 XP_067733485.1 putative leucine-rich repeat-containing protein [Monocercomonoides exilis] diamond 330 63.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
31531758 31531758 PRJNA540466_S_NODE_6356_length_626_cov_4.529837_g5904_i0 PRJNA540466 6356 626 4.529837 28.35677962 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 67.8 3.16e-9   NR KAJ4459036.1 342808 g5904 i0 54.5 0.263578274760383 55 25 26.4 0 4 168 674 728 KAJ4459036.1 hypothetical protein PAPYR_5087 [Paratrimastix pyriformis] diamond 165 67.8 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;