RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA540466", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA540466 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26634576 26634576 PRJNA540466_S_NODE_19341_length_402_cov_1.924012_g18792_i0 PRJNA540466 19341 402 1.924012 7.73452824 Fidelibacterota bacterium 2026760 Bacteria Bacteria 80.1 6.72e-15   NR MFQ6674882.1 2026760 g18792 i0 40.8 3.85820895522388 98 52 73.1 2 5 298 207 298 MFQ6674882.1 diacylglycerol/lipid kinase family protein [Fidelibacterota bacterium] diamond 1551 80.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29808338 29808338 PRJNA540466_S_NODE_26711_length_346_cov_1.633700_g26162_i0 PRJNA540466 26711 346 1.6337 5.652602 root 1 Root_unresolved Root_unresolved 103 1.26e-23   NR MAV59043.1 2026760 g26162 i0 68.1 2.99132947976879 69 22 59.8 0 3 209 325 393 MAV59043.1 glycine C-acetyltransferase [Fidelibacterota bacterium] diamond 1035 103 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30836138 30836138 PRJNA540466_S_NODE_8914_length_558_cov_2.639175_g8406_i0 PRJNA540466 8914 558 2.639175 14.7265965 Fidelibacterota bacterium 2026760 Bacteria Bacteria 140 7.52e-39   NR MDP7465455.1 2026760 g8406 i0 48.9 1.49462365591398 139 69 73.7 2 2 412 6 144 MDP7465455.1 GNAT family N-acetyltransferase [Fidelibacterota bacterium] diamond 834 140 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;