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contig_metadata

32 rows where bioproject = "PRJNA540466" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 32 ✖

bioproject 1

  • PRJNA540466 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3059101 3059101 PRJNA540466_S_NODE_56343_length_252_cov_0.905028_g55794_i0 PRJNA540466 56343 252 0.905028 2.28067056 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 110 1.34e-19   NTclustered gi|1958123529|gb|CP065016.1| 2026720 g55794 i0 98.413 5.11507936507936 63 0 25 1 23 84 465458 465396 Candidatus Saccharibacteria bacterium isolate Vibo_18-Q3-R45-57_BAT3C.117_fly chromosome, complete genome blastn 1289 110 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
10712209 10712209 PRJNA540466_S_NODE_47129_length_270_cov_5.598985_g46580_i0 PRJNA540466 47129 270 5.598985 15.1172595 Candidatus Mycosynbacter amalyticus 2665156 Bacteria Bacteria 300 8e-77   NTclustered gi|1799615131|gb|CP045921.1| 2665156 g46580 i0 92.788 168.02962962963 208 14 77 1 41 248 220099 219893 Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome blastn 45368 300 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Mycosynbacter Candidatus Mycosynbacter amalyticus
21520543 21520543 PRJNA540466_S_NODE_65497_length_236_cov_2.386503_g64948_i0 PRJNA540466 65497 236 2.386503 5.63214708 Candidatus Saccharimonas 1331051 Bacteria Bacteria 198 2.57e-46   NTclustered gi|499052612|gb|CP005957.1| 1332188 g64948 i0 92.143 36.2415254237288 140 11 59 0 97 236 694916 694777 Candidatus Saccharimonas aalborgensis isolate TM71 chromosome, complete genome blastn 8553 198 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas aalborgensis
26729222 26729222 PRJNA540466_S_NODE_23561_length_367_cov_2.003401_g23012_i0 PRJNA540466 23561 367 2.003401 7.35248167 Candidatus Methylomirabilis sp. 2032687 Bacteria Bacteria 129 7.05e-34   NR HEX9899243.1 2032687 g23012 i0 70.9 7.25068119891008 79 23 64.6 0 329 93 36 114 HEX9899243.1 ADP-ribosylglycohydrolase family protein [Candidatus Methylomirabilis sp.] diamond 2661 129 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.
26839843 26839843 PRJNA540466_S_NODE_38301_length_295_cov_4.180180_g37752_i0 PRJNA540466 38301 295 4.18018 12.331531 Bacteria 2 Bacteria Bacteria 46.6 0.00304   NR MDD5567343.1 2052139 g37752 i0 34.1 1.72881355932203 85 52 83.4 3 21 266 461 544 MDD5567343.1 FG-GAP-like repeat-containing protein [Patescibacteria group bacterium] diamond 510 47 0.991489361702128 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27330806 27330806 PRJNA540466_S_NODE_21183_length_385_cov_3.144231_g20634_i0 PRJNA540466 21183 385 3.144231 12.10528935 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 167 7.22e-50   NR TAH34051.1 2026720 g20634 i0 82.3 0.966233766233766 124 22 96.6 0 383 12 83 206 TAH34051.1 MAG: hypothetical protein EYC59_03580 [Candidatus Saccharibacteria bacterium] diamond 372 167 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27457255 27457255 PRJNA540466_S_NODE_55103_length_254_cov_1.569061_g54554_i0 PRJNA540466 55103 254 1.569061 3.98541494 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 47.4 0.00102   NR MCK4765683.1 2052149 g54554 i0 43.9 0.673228346456693 57 31 66.1 1 213 46 496 552 MCK4765683.1 SBBP repeat-containing protein [Candidatus Aminicenantes bacterium] diamond 171 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
27710090 27710090 PRJNA540466_S_NODE_14224_length_461_cov_2.822165_g13677_i0 PRJNA540466 14224 461 2.822165 13.01018065 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 124 2.45e-33   NR HEV2403706.1 2973664 g13677 i0 60.2 0.637744034707158 98 39 63.8 0 150 443 23 120 HEV2403706.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 294 124 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28025453 28025453 PRJNA540466_S_NODE_34505_length_309_cov_2.118644_g33956_i0 PRJNA540466 34505 309 2.118644 6.54660996 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.8 2.3e-7   NR MDR3582048.1 2053589 g33956 i0 41.1 0.922330097087379 95 49 89.3 2 295 20 12 102 MDR3582048.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 285 55.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28025461 28025461 PRJNA540466_S_NODE_48605_length_267_cov_2.381443_g48056_i0 PRJNA540466 48605 267 2.381443 6.35845281 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 137 1.12e-37   NR TAH31809.1 2026720 g48056 i0 80.7 1.97752808988764 88 17 98.9 0 1 264 205 292 TAH31809.1 MAG: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Candidatus Saccharibacteria bacterium] diamond 528 137 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28277820 28277820 PRJNA540466_S_NODE_48806_length_267_cov_1.195876_g48257_i0 PRJNA540466 48806 267 1.195876 3.19298892 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 92.4 5.55e-20   NR NCU38075.1 2026720 g48257 i0 69.7 1.49438202247191 66 20 74.2 0 264 67 274 339 NCU38075.1 YvcK family protein [Candidatus Saccharibacteria bacterium] diamond 399 92.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28688682 28688682 PRJNA540466_S_NODE_66127_length_234_cov_2.527950_g65578_i0 PRJNA540466 66127 234 2.52795 5.915403 Candidatus Vampirococcus lugosii 2789015 Bacteria Bacteria 73.9 3.47e-13   NR WP_338032118.1 2789015 g65578 i0 52 0.961538461538462 75 31 89.7 1 210 1 104 178 WP_338032118.1 DEAD/DEAH box helicase family protein [Candidatus Vampirococcus lugosii] diamond 225 73.9 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota       Vampirococcus Candidatus Vampirococcus lugosii
29351586 29351586 PRJNA540466_S_NODE_27129_length_343_cov_3.696296_g26580_i0 PRJNA540466 27129 343 3.696296 12.67829528 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 51.2 1.3e-4   NR HOI89085.1 3022866 g26580 i0 36.6 0.717201166180758 82 48 69.1 2 335 99 3975 4055 HOI89085.1 hypothetical protein [Candidatus Rifleibacterium sp.] diamond 246 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.
29509300 29509300 PRJNA540466_S_NODE_45470_length_275_cov_1.143564_g44921_i0 PRJNA540466 45470 275 1.143564 3.144801 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 83.2 1.54e-16   NR USN97113.1 2052152 g44921 i0 64.9 0.84 77 20 79.6 3 219 1 1 74 USN97113.1 MAG: RNA polymerase sigma factor RpoD [Candidatus Nomurabacteria bacterium] diamond 231 83.2 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
29635287 29635287 PRJNA540466_S_NODE_28290_length_337_cov_2.034091_g27741_i0 PRJNA540466 28290 337 2.034091 6.85488667 Candidatus Saccharibacteria bacterium 49-2 1895829 Bacteria Bacteria 188 4.5899999999999994e-57   NR OJU87866.1 1895829 g27741 i0 95 0.899109792284866 101 5 89.9 0 24 326 195 295 OJU87866.1 MAG: 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Candidatus Saccharibacteria bacterium 49-20] diamond 303 188 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
30203963 30203963 PRJNA540466_S_NODE_6692_length_616_cov_3.064457_g6234_i0 PRJNA540466 6692 616 3.064457 18.87705512 Candidatus Sungbacteria bacterium RIFCSPHIGHO2_ 1802270 Bacteria Bacteria 137 1.09e-36   NR OGZ98134.1 1802270 g6234 i0 38.2 2.73214285714286 191 114 91.6 2 10 573 18 207 OGZ98134.1 MAG: hypothetical protein A3C07_04910 [Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_47_11] diamond 1683 137 1 Bacteria Bacteria candidate phyla   Candidatus Sungiibacteriota         Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_47_11
30250987 30250987 PRJNA540466_S_NODE_55852_length_252_cov_7.212291_g55303_i0 PRJNA540466 55852 252 7.212291 18.17497332 Bacteria 2 Bacteria Bacteria 79.7 3.96e-15   NR MDB5161849.1 2026720 g55303 i0 90.9 7.27380952380952 44 4 52.4 0 19 150 24 67 MDB5161849.1 rane protein of unknown function [Candidatus Saccharibacteria bacterium] diamond 1833 79.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30314434 30314434 PRJNA540466_S_NODE_11012_length_513_cov_1.722727_g10473_i0 PRJNA540466 11012 513 1.722727 8.83758951 Bacteria 2 Bacteria Bacteria 77.8 2.24e-13   NR MEK7665815.1 2052139 g10473 i0 42.1 8.28070175438597 107 57 62.6 2 512 192 248 349 MEK7665815.1 peptide chain release factor 1 [Patescibacteria group bacterium] diamond 4248 78.2 0.994884910485933 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30425799 30425799 PRJNA540466_S_NODE_10913_length_515_cov_1.567873_g10374_i0 PRJNA540466 10913 515 1.567873 8.07454595 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 104 1.7599999999999994e-23   NR MCS5611368.1 2026781 g10374 i0 35.1 2.63883495145631 151 94 85.6 1 515 75 141 291 MCS5611368.1 SDR family oxidoreductase [Candidatus Poribacteria bacterium] diamond 1359 104 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30520157 30520157 PRJNA540466_S_NODE_55313_length_253_cov_4.766667_g54764_i0 PRJNA540466 55313 253 4.766667 12.05966751 Minisyncoccota bacterium 2053589 Bacteria Bacteria 41.2 0.0306   NR MFA5132704.1 2053589 g54764 i0 62.5 0.379446640316206 32 12 37.9 0 36 131 41 72 MFA5132704.1 DnaJ domain-containing protein [Candidatus Paceibacterota bacterium] diamond 96 41.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30583149 30583149 PRJNA540466_S_NODE_27013_length_344_cov_1.845018_g26464_i0 PRJNA540466 27013 344 1.845018 6.34686192 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 75.1 2.2e-15   NR MEO8691626.1 1917697 g26464 i0 53.4 0.505813953488372 58 27 50.6 0 252 79 1 58 MEO8691626.1 hypothetical protein [Candidatus Saccharimonas sp.] diamond 174 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
30836118 30836118 PRJNA540466_S_NODE_36794_length_301_cov_1.013158_g36245_i0 PRJNA540466 36794 301 1.013158 3.04960558 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 61.2 1.1e-8   NR GMU19511.1 2803731 g36245 i0 47.1 0.697674418604651 70 35 69.8 1 290 81 160 227 GMU19511.1 MAG: hypothetical protein AMXMBFR12_07030 [Candidatus Babeliales bacterium] diamond 210 61.2 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
30994178 30994178 PRJNA540466_S_NODE_64454_length_239_cov_3.337349_g63905_i0 PRJNA540466 64454 239 3.337349 7.97626411 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 51.2 9.32e-6   NR HEY5267673.1 2973664 g63905 i0 44.8 1.33054393305439 58 31 72.8 1 21 194 82 138 HEY5267673.1 HNH endonuclease [Candidatus Saccharimonadales bacterium] diamond 318 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31120154 31120154 PRJNA540466_S_NODE_21115_length_386_cov_1.431310_g20566_i0 PRJNA540466 21115 386 1.43131 5.5248566 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 178 7.37e-52   NR TAH32542.1 2026720 g20566 i0 85.6 0.917098445595855 118 17 91.7 0 366 13 59 176 TAH32542.1 MAG: hypothetical protein EYC58_02710 [Candidatus Saccharibacteria bacterium] diamond 354 178 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31246858 31246858 PRJNA540466_S_NODE_38195_length_296_cov_1.282511_g37646_i0 PRJNA540466 38195 296 1.282511 3.79623256 Candidatus Saccharibacteria bacterium 32-5 1970480 Bacteria Bacteria 60.1 3.99e-9   NR OYX37813.1 1970480 g37646 i0 51.9 1.60135135135135 52 25 52.7 0 282 127 39 90 OYX37813.1 MAG: RNA-binding protein [Candidatus Saccharibacteria bacterium 32-50-10] diamond 474 60.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-10
31278413 31278413 PRJNA540466_S_NODE_27795_length_340_cov_0.906367_g27246_i0 PRJNA540466 27795 340 0.906367 3.0816478 Patescibacteria group bacterium 2052139 Bacteria Bacteria 91.3 1.03e-20   NR MDF1497682.1 2052139 g27246 i0 56.9 2.34705882352941 65 28 57.4 0 325 131 64 128 MDF1497682.1 8-oxo-dGTP diphosphatase [Patescibacteria group bacterium] diamond 798 91.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31500119 31500119 PRJNA540466_S_NODE_66796_length_232_cov_2.855346_g66247_i0 PRJNA540466 66796 232 2.855346 6.62440272 Candidatus Yanofskybacteria bacterium CG1 2052154 Bacteria Bacteria 44.7 0.00682   NR PJE51345.1 1975096 g66247 i0 38.2 0.711206896551724 55 30 71.1 2 47 211 467 517 PJE51345.1 MAG: hypothetical protein COV29_01155 [Candidatus Yanofskybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_36_16] diamond 165 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Yanofskyibacteriota         Candidatus Yanofskybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_36_16
31721328 31721328 PRJNA540466_S_NODE_19117_length_404_cov_2.752266_g18568_i0 PRJNA540466 19117 404 2.752266 11.11915464 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 188 2.85e-58   NR HET9411562.1 2973664 g18568 i0 78.7 3.62376237623762 122 26 90.6 0 389 24 1 122 HET9411562.1 uridylate kinase [Candidatus Saccharimonadales bacterium] diamond 1464 188 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
32006129 32006129 PRJNA540466_S_NODE_43298_length_280_cov_3.512077_g42749_i0 PRJNA540466 43298 280 3.512077 9.8338156 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 81.6 4.36e-16   NR TAH31809.1 2026720 g42749 i0 78.2 1.15714285714286 55 12 58.9 0 19 183 243 297 TAH31809.1 MAG: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Candidatus Saccharibacteria bacterium] diamond 324 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32242799 32242799 PRJNA540466_S_NODE_65698_length_235_cov_3.672840_g65149_i0 PRJNA540466 65698 235 3.67284 8.631174 Bacteria 2 Bacteria Bacteria 122 1.09e-32   NR OYW41872.1 1970477 g65149 i0 84.5 3.62553191489362 71 11 90.6 0 3 215 155 225 OYW41872.1 MAG: 16S rRNA (cytosine(1402)-N(4))-methyltransferase, partial [Candidatus Saccharibacteria bacterium 32-45-3] diamond 852 123 0.991869918699187 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-45-3
32306043 32306043 PRJNA540466_S_NODE_28079_length_338_cov_2.550943_g27530_i0 PRJNA540466 28079 338 2.550943 8.62218734 Bacteria 2 Bacteria Bacteria 176 2.07e-51   NR HRF28803.1 2026720 g27530 i0 83.2 8.36094674556213 95 16 84.3 0 23 307 15 109 HRF28803.1 M50 family metallopeptidase [Candidatus Saccharibacteria bacterium] diamond 2826 176 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32669933 32669933 PRJNA540466_S_NODE_58160_length_249_cov_1.329545_g57611_i0 PRJNA540466 58160 249 1.329545 3.31056705 Candidatus Firestonebacteria bacterium RIFOXYA2_FULL_4 2715505 Bacteria Bacteria 45.8 0.00277   NR OGF49179.1 1817859 g57611 i0 41.7 0.578313253012048 48 28 57.8 0 65 208 46 93 OGF49179.1 MAG: hypothetical protein A2231_01110 [Candidatus Firestonebacteria bacterium RIFOXYA2_FULL_40_8] diamond 144 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Firestoneibacteriota         Candidatus Firestonebacteria bacterium RIFOXYA2_FULL_40_8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;