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contig_metadata

7 rows where bioproject = "PRJNA534016" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA534016 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15810277 15810277 PRJNA534016_P_NODE_18673_length_237_cov_2.756098_g18583_i0 PRJNA534016 18673 237 2.756098 6.53195226 Promethearchaeota archaeon 2053489 Archaea Archaea 52.8 0.021   NTclustered gi|2107767831|gb|CP070831.1| 2053489 g18583 i0 100 0.118143459915612 28 0 12 0 160 187 856896 856923 MAG: Promethearchaeota archaeon isolate bin108 chromosome blastn 28 52.8 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
22184303 22184303 PRJNA534016_P_NODE_17598_length_242_cov_2.071006_g17508_i0 PRJNA534016 17598 242 2.071006 5.01183452 uncultured Nanobdellati archaeon 2219213 Archaea Archaea 52.8 0.022   NTclustered gi|1572541193|emb|LR135916.1| 2219213 g17508 i0 96.774 0.128099173553719 31 1 13 0 41 71 57658 57628 uncultured DPANN archaeon genomic DNA containing deoA-rbcL-e2b2 region region blastn 31 52.8 1 Archaea   Nanobdellati           uncultured Nanobdellati archaeon
23459664 23459664 PRJNA534016_P_NODE_13299_length_253_cov_1.711111_g13209_i0 PRJNA534016 13299 253 1.711111 4.32911083 Candidatus Nitrosopelagicus brevis 1410606 Archaea Archaea 52.8 0.023   NTclustered gi|742120812|gb|CP007026.1| 1410606 g13209 i0 100 0.110671936758893 28 0 11 0 55 82 863770 863743 Candidatus Nitrosopelagicus brevis strain CN25, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosopelagicus Candidatus Nitrosopelagicus brevis
29730112 29730112 PRJNA534016_P_NODE_8570_length_290_cov_2.829493_g8480_i0 PRJNA534016 8570 290 2.829493 8.2055297 candidate division MSBL1 archaeon SCGC-AAA259I 215777 Archaea Archaea 42.7 0.0294   NR KXA95608.1 1698266 g8480 i0 32.3 0.672413793103448 65 40 65.2 2 34 222 83 145 KXA95608.1 hypothetical protein AKJ36_00120 [candidate division MSBL1 archaeon SCGC-AAA259I07] diamond 195 42.7 1 Archaea candidate division MSBL1 Methanobacteriati Methanobacteriota         candidate division MSBL1 archaeon SCGC-AAA259I07
30804499 30804499 PRJNA534016_P_NODE_18474_length_241_cov_0.886905_g18384_i0 PRJNA534016 18474 241 0.886905 2.13744105 Candidatus Methanomethylophilaceae archaeon 2517205 Archaea Archaea 42.7 0.0359   NR MBR7153169.1 2517205 g18384 i0 43.2 0.460580912863071 37 20 44.8 1 14 121 41 77 MBR7153169.1 sel1 repeat family protein [Candidatus Methanomethylophilaceae archaeon] diamond 111 42.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae   Candidatus Methanomethylophilaceae archaeon
32385755 32385755 PRJNA534016_P_NODE_9399_length_284_cov_1.127962_g9309_i0 PRJNA534016 9399 284 1.127962 3.20341208 archaeon 1906665 Archaea Archaea 71.6 4.07e-12   NR MDP2437237.1 1906665 g9309 i0 32.9 0.897887323943662 85 56 88.7 1 254 3 153 237 MDP2437237.1 IBR domain-containing protein [archaeon] diamond 255 71.6 1 Archaea               archaeon
32449240 32449240 PRJNA534016_P_NODE_1919_length_589_cov_3.463178_g1832_i0 PRJNA534016 1919 589 3.463178 20.39811842 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 47.4 0.0225   NR MBN1503339.1 2026803 g1832 i0 25.8 0.906621392190153 178 102 78.9 7 531 67 530 700 MBN1503339.1 fibronectin type III domain-containing protein [Candidatus Woesearchaeota archaeon] diamond 534 47.4 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;