contig_metadata
60 rows where bioproject = "PRJNA534016" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 507478 | 507478 | PRJNA534016_P_NODE_13361_length_252_cov_2.804469_g13271_i0 | PRJNA534016 | 13361 | 252 | 2.804469 | 7.06726188 | Actinomyces | 1654 | Bacteria | Bacteria | 160 | 4.89e-49 | NR | WP_076131286.1 | 1655 | g13271 | i0 | 100 | 1.97619047619048 | 83 | 0 | 98.8 | 0 | 250 | 2 | 26 | 108 | WP_076131286.1 NYN domain-containing protein [Actinomyces naeslundii] | diamond | 498 | 160 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces naeslundii | ||
| 1118146 | 1118146 | PRJNA534016_P_NODE_12401_length_260_cov_1.647059_g12311_i0 | PRJNA534016 | 12401 | 260 | 1.647059 | 4.2823534 | Cutibacterium | 1912216 | Bacteria | Bacteria | 481 | 2.55e-131 | NTclustered | gi|1755605466|dbj|AP019664.1| | 1747 | g12311 | i0 | 100 | 50.9846153846154 | 260 | 0 | 100 | 0 | 1 | 260 | 1076096 | 1076355 | Cutibacterium acnes TP-CU389 DNA, complete genome | blastn | 13256 | 481 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 2393707 | 2393707 | PRJNA534016_P_NODE_12942_length_256_cov_1.327869_g12852_i0 | PRJNA534016 | 12942 | 256 | 1.327869 | 3.39934464 | Cutibacterium | 1912216 | Bacteria | Bacteria | 468 | 1.95e-127 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g12852 | i0 | 99.609 | 51 | 256 | 1 | 100 | 0 | 1 | 256 | 1077487 | 1077742 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 13056 | 468 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 2393708 | 2393708 | PRJNA534016_P_NODE_13302_length_253_cov_1.711111_g13212_i0 | PRJNA534016 | 13302 | 253 | 1.711111 | 4.32911083 | Cutibacterium | 1912216 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g13212 | i0 | 100 | 57.8735177865613 | 253 | 0 | 100 | 0 | 1 | 253 | 1237506 | 1237254 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 14642 | 468 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 2393770 | 2393770 | PRJNA534016_P_NODE_8542_length_291_cov_1.412844_g8452_i0 | PRJNA534016 | 8542 | 291 | 1.412844 | 4.11137604 | Cutibacterium | 1912216 | Bacteria | Bacteria | 538 | 1.6999999999999994e-148 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g8452 | i0 | 100 | 260.896907216495 | 291 | 0 | 100 | 0 | 1 | 291 | 608634 | 608924 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 75921 | 538 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 4334449 | 4334449 | PRJNA534016_P_NODE_18344_length_241_cov_0.916667_g18254_i0 | PRJNA534016 | 18344 | 241 | 0.916667 | 2.20916747 | Nocardioides sp. NBC_00163 | 2975999 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2656948505|gb|CP108155.1| | 2975999 | g18254 | i0 | 90.244 | 0.518672199170125 | 41 | 4 | 17 | 0 | 73 | 113 | 5001224 | 5001264 | Nocardioides sp. NBC_00163 chromosome, complete genome | blastn | 125 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. NBC_00163 | ||
| 6221900 | 6221900 | PRJNA534016_P_NODE_18925_length_231_cov_3.803797_g18835_i0 | PRJNA534016 | 18925 | 231 | 3.803797 | 8.78677107 | Cutibacterium | 1912216 | Bacteria | Bacteria | 427 | 2.9399999999999998e-115 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g18835 | i0 | 100 | 63.5714285714286 | 231 | 0 | 100 | 0 | 1 | 231 | 1417045 | 1416815 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 14685 | 427 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 6885109 | 6885109 | PRJNA534016_P_NODE_15246_length_248_cov_0.880000_g15156_i0 | PRJNA534016 | 15246 | 248 | 0.88 | 2.1824 | Microbacterium testaceum | 2033 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2530242188|gb|CP103793.1| | 2033 | g15156 | i0 | 100 | 90.7620967741936 | 248 | 0 | 100 | 0 | 1 | 248 | 3459263 | 3459016 | Microbacterium testaceum strain D12 chromosome, complete genome | blastn | 22509 | 459 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium testaceum | ||
| 7496352 | 7496352 | PRJNA534016_P_NODE_12046_length_263_cov_1.594737_g11956_i0 | PRJNA534016 | 12046 | 263 | 1.594737 | 4.19415831 | Microbacteriaceae | 85023 | Bacteria | Bacteria | 486 | 5.5499999999999986e-133 | NTclustered | gi|2837339191|gb|CP171452.1| | 2035 | g11956 | i0 | 100 | 277.003802281369 | 263 | 0 | 100 | 0 | 1 | 263 | 1326587 | 1326849 | Curtobacterium flaccumfaciens strain NRRL B-729 chromosome, complete genome | blastn | 72852 | 486 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Curtobacterium | Curtobacterium flaccumfaciens | ||
| 8160188 | 8160188 | PRJNA534016_P_NODE_10227_length_277_cov_1.509804_g10137_i0 | PRJNA534016 | 10227 | 277 | 1.509804 | 4.18215708 | Propionibacterium acidifaciens | 556499 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|1518058351|gb|CP033719.1| | 556499 | g10137 | i0 | 100 | 0.101083032490975 | 28 | 0 | 10 | 0 | 27 | 54 | 1524057 | 1524030 | Propionibacterium acidifaciens strain FDAARGOS_576 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Propionibacterium | Propionibacterium acidifaciens | ||
| 8160396 | 8160396 | PRJNA534016_P_NODE_8787_length_289_cov_1.083333_g8697_i0 | PRJNA534016 | 8787 | 289 | 1.083333 | 3.13083237 | Microbacterium luteum | 2782167 | Bacteria | Bacteria | 534 | 2.18e-147 | NTclustered | gi|1929479553|gb|CP063814.1| | 2782167 | g8697 | i0 | 100 | 1 | 289 | 0 | 100 | 0 | 1 | 289 | 3372391 | 3372103 | Microbacterium sp. A18JL200 chromosome, complete genome | blastn | 289 | 534 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium luteum | ||
| 8771286 | 8771286 | PRJNA534016_P_NODE_10087_length_278_cov_1.931707_g9997_i0 | PRJNA534016 | 10087 | 278 | 1.931707 | 5.37014546 | Cutibacterium | 1912216 | Bacteria | Bacteria | 514 | 2.7199999999999996e-141 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g9997 | i0 | 100 | 53.0035971223022 | 278 | 0 | 100 | 0 | 1 | 278 | 1544940 | 1544663 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 14735 | 514 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 8771335 | 8771335 | PRJNA534016_P_NODE_5647_length_350_cov_3.332130_g5557_i0 | PRJNA534016 | 5647 | 350 | 3.33213 | 11.662455 | root | 1 | Root_unresolved | Root_unresolved | 647 | 0 | NTclustered | gi|50082565|gb|AY642042.1| | 1747 | g5557 | i0 | 100 | 129 | 350 | 0 | 100 | 0 | 1 | 350 | 351 | 2 | Propionibacterium acnes isolate L1958 16S ribosomal RNA gene, partial sequence | blastn | 45150 | 647 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 8771353 | 8771353 | PRJNA534016_P_NODE_9507_length_283_cov_1.300000_g9417_i0 | PRJNA534016 | 9507 | 283 | 1.3 | 3.679 | Cutibacterium | 1912216 | Bacteria | Bacteria | 512 | 9.97e-141 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g9417 | i0 | 99.293 | 53 | 283 | 2 | 100 | 0 | 1 | 283 | 1224421 | 1224703 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 14999 | 512 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 9435750 | 9435750 | PRJNA534016_P_NODE_12548_length_259_cov_1.655914_g12458_i0 | PRJNA534016 | 12548 | 259 | 1.655914 | 4.28881726 | Mycolicibacterium moriokaense | 39691 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|1806209106|dbj|AP022560.1| | 39691 | g12458 | i0 | 100 | 0.108108108108108 | 28 | 0 | 11 | 0 | 143 | 170 | 5205106 | 5205133 | Mycolicibacterium moriokaense JCM 6375 DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium moriokaense | ||
| 10046704 | 10046704 | PRJNA534016_P_NODE_12448_length_260_cov_1.417112_g12358_i0 | PRJNA534016 | 12448 | 260 | 1.417112 | 3.6844912 | Cutibacterium | 1912216 | Bacteria | Bacteria | 475 | 1.1899999999999999e-129 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g12358 | i0 | 99.615 | 57.0115384615385 | 260 | 1 | 100 | 0 | 1 | 260 | 1667670 | 1667929 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 14823 | 475 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 10046719 | 10046719 | PRJNA534016_P_NODE_16288_length_245_cov_1.709302_g16198_i0 | PRJNA534016 | 16288 | 245 | 1.709302 | 4.1877899 | Cutibacterium | 1912216 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g16198 | i0 | 100 | 52.8040816326531 | 245 | 0 | 100 | 0 | 1 | 245 | 852075 | 851831 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 12937 | 453 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 10046729 | 10046729 | PRJNA534016_P_NODE_17408_length_243_cov_0.905882_g17318_i0 | PRJNA534016 | 17408 | 243 | 0.905882 | 2.20129326 | Cutibacterium | 1912216 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g17318 | i0 | 100 | 53 | 243 | 0 | 100 | 0 | 1 | 243 | 463624 | 463866 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 12879 | 449 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 10711480 | 10711480 | PRJNA534016_P_NODE_11389_length_268_cov_1.579487_g11299_i0 | PRJNA534016 | 11389 | 268 | 1.579487 | 4.23302516 | Rhodococcus sp. 008 | 1723645 | Bacteria | Bacteria | 479 | 9.499999999999996e-131 | NTclustered | gi|1042829561|gb|CP012749.1| | 1723645 | g11299 | i0 | 98.881 | 43.9328358208955 | 268 | 3 | 100 | 0 | 1 | 268 | 3396989 | 3397256 | Rhodococcus sp. 008, complete genome | blastn | 11774 | 479 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus sp. 008 | ||
| 10711581 | 10711581 | PRJNA534016_P_NODE_19329_length_201_cov_4.109375_g19239_i0 | PRJNA534016 | 19329 | 201 | 4.109375 | 8.25984375 | Microbacterium rhizosphaerae | 1678237 | Bacteria | Bacteria | 176 | 9.94e-40 | NTclustered | gi|2626405257|gb|CP139368.1| | 1678237 | g19239 | i0 | 88 | 21.044776119403 | 150 | 16 | 74 | 2 | 53 | 201 | 1525169 | 1525021 | Microbacterium rhizosphaerae strain KACC 19337 chromosome, complete genome | blastn | 4230 | 176 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium rhizosphaerae | ||
| 11321310 | 11321310 | PRJNA534016_P_NODE_10729_length_273_cov_1.540000_g10639_i0 | PRJNA534016 | 10729 | 273 | 1.54 | 4.2042 | Cutibacterium | 1912216 | Bacteria | Bacteria | 505 | 1.6e-138 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g10639 | i0 | 100 | 52.8498168498168 | 273 | 0 | 100 | 0 | 1 | 273 | 1675596 | 1675868 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 14428 | 505 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11321312 | 11321312 | PRJNA534016_P_NODE_12029_length_263_cov_1.621053_g11939_i0 | PRJNA534016 | 12029 | 263 | 1.621053 | 4.26336939 | Cutibacterium | 1912216 | Bacteria | Bacteria | 486 | 5.5499999999999986e-133 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g11939 | i0 | 100 | 51.3346007604563 | 263 | 0 | 100 | 0 | 1 | 263 | 1401174 | 1401436 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 13501 | 486 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11321318 | 11321318 | PRJNA534016_P_NODE_13189_length_254_cov_1.486188_g13099_i0 | PRJNA534016 | 13189 | 254 | 1.486188 | 3.77491752 | Cutibacterium | 1912216 | Bacteria | Bacteria | 464 | 2.4999999999999994e-126 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g13099 | i0 | 99.606 | 59.992125984252 | 254 | 1 | 100 | 0 | 1 | 254 | 127845 | 127592 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 15238 | 464 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11321319 | 11321319 | PRJNA534016_P_NODE_13569_length_251_cov_1.640449_g13479_i0 | PRJNA534016 | 13569 | 251 | 1.640449 | 4.11752699 | Cutibacterium | 1912216 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g13479 | i0 | 100 | 67.7091633466136 | 251 | 0 | 100 | 0 | 1 | 251 | 2209720 | 2209470 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 16995 | 464 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11986190 | 11986190 | PRJNA534016_P_NODE_14610_length_249_cov_0.875000_g14520_i0 | PRJNA534016 | 14610 | 249 | 0.875 | 2.17875 | Mycolicibacterium neoaurum | 1795 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2039848366|gb|CP074376.1| | 1795 | g14520 | i0 | 100 | 2 | 249 | 0 | 100 | 0 | 1 | 249 | 4960972 | 4960724 | Mycolicibacterium neoaurum strain MN2019 chromosome, complete genome | blastn | 498 | 460 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium neoaurum | ||
| 15146327 | 15146327 | PRJNA534016_P_NODE_14352_length_250_cov_0.870056_g14262_i0 | PRJNA534016 | 14352 | 250 | 0.870056 | 2.17514 | Cutibacterium | 1912216 | Bacteria | Bacteria | 453 | 5.31e-123 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g14262 | i0 | 100 | 51.94 | 245 | 0 | 98 | 0 | 6 | 250 | 715806 | 715562 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 12985 | 453 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 16421029 | 16421029 | PRJNA534016_P_NODE_11753_length_265_cov_1.604167_g11663_i0 | PRJNA534016 | 11753 | 265 | 1.604167 | 4.25104255 | Cutibacterium | 1912216 | Bacteria | Bacteria | 490 | 4.3299999999999986e-134 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g11663 | i0 | 100 | 51 | 265 | 0 | 100 | 0 | 1 | 265 | 1175811 | 1175547 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 13515 | 490 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 16421040 | 16421040 | PRJNA534016_P_NODE_13653_length_251_cov_0.865169_g13563_i0 | PRJNA534016 | 13653 | 251 | 0.865169 | 2.17157419 | Corynebacterium | 1716 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|1231786474|emb|LT906481.1| | 43771 | g13563 | i0 | 100 | 7.03585657370518 | 251 | 0 | 100 | 0 | 1 | 251 | 2175758 | 2176008 | Corynebacterium urealyticum strain NCTC12011 genome assembly, chromosome: 1 | blastn | 1766 | 464 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium urealyticum | ||
| 17084854 | 17084854 | PRJNA534016_P_NODE_11174_length_270_cov_1.055838_g11084_i0 | PRJNA534016 | 11174 | 270 | 1.055838 | 2.8507626 | Rothia sp. SD9660Na | 3047030 | Bacteria | Bacteria | 466 | 7.46e-127 | NTclustered | gi|2509123141|gb|CP125946.1| | 3047030 | g11084 | i0 | 97.778 | 7.73333333333333 | 270 | 6 | 100 | 0 | 1 | 270 | 619066 | 619335 | Rothia sp. SD9660Na chromosome, complete genome | blastn | 2088 | 466 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia sp. SD9660Na | ||
| 17084964 | 17084964 | PRJNA534016_P_NODE_18114_length_241_cov_1.684524_g18024_i0 | PRJNA534016 | 18114 | 241 | 1.684524 | 4.05970284 | Nocardioides sp. zg-1228 | 2763008 | Bacteria | Bacteria | 124 | 4.53e-24 | NTclustered | gi|1995570698|gb|CP070961.1| | 2763008 | g18024 | i0 | 77.049 | 1.01244813278008 | 244 | 38 | 95 | 8 | 14 | 241 | 2474467 | 2474226 | Nocardioides sp. zg-1228 chromosome, complete genome | blastn | 244 | 124 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. zg-1228 | ||
| 17696252 | 17696252 | PRJNA534016_P_NODE_9914_length_280_cov_1.004831_g9824_i0 | PRJNA534016 | 9914 | 280 | 1.004831 | 2.8135268 | Cutibacterium | 1912216 | Bacteria | Bacteria | 518 | 2.12e-142 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g9824 | i0 | 100 | 280.307142857143 | 280 | 0 | 100 | 0 | 1 | 280 | 56522 | 56801 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 78486 | 518 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 18969758 | 18969758 | PRJNA534016_P_NODE_1075_length_799_cov_3.914601_g998_i0 | PRJNA534016 | 1075 | 799 | 3.914601 | 31.27766199 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1476 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g998 | i0 | 100 | 278.115143929912 | 799 | 0 | 100 | 0 | 1 | 799 | 55366 | 56164 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 222214 | 1476 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 18969793 | 18969793 | PRJNA534016_P_NODE_18595_length_238_cov_4.363636_g18505_i0 | PRJNA534016 | 18595 | 238 | 4.363636 | 10.38545368 | Cutibacterium | 1912216 | Bacteria | Bacteria | 440 | 3.899999999999999e-119 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g18505 | i0 | 100 | 267.865546218487 | 238 | 0 | 100 | 0 | 1 | 238 | 56216 | 56453 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 63752 | 440 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 20244764 | 20244764 | PRJNA534016_P_NODE_9236_length_285_cov_1.452830_g9146_i0 | PRJNA534016 | 9236 | 285 | 1.45283 | 4.1405655 | Cutibacterium | 1912216 | Bacteria | Bacteria | 527 | 3.59e-145 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g9146 | i0 | 100 | 52.9614035087719 | 285 | 0 | 100 | 0 | 1 | 285 | 479284 | 479000 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 15094 | 527 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 20244765 | 20244765 | PRJNA534016_P_NODE_9336_length_284_cov_1.872038_g9246_i0 | PRJNA534016 | 9336 | 284 | 1.872038 | 5.31658792 | Mycobacteroides | 670516 | Bacteria | Bacteria | 220 | 6.79e-53 | NTclustered | gi|1014174528|gb|CP014954.1| | 36809 | g9246 | i0 | 81.004 | 39.2957746478873 | 279 | 51 | 98 | 2 | 1 | 278 | 2661193 | 2660916 | Mycobacteroides abscessus strain FLAC008 chromosome, complete genome | blastn | 11160 | 220 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacteroides | Mycobacteroides abscessus | ||
| 21520266 | 21520266 | PRJNA534016_P_NODE_12297_length_261_cov_1.622340_g12207_i0 | PRJNA534016 | 12297 | 261 | 1.62234 | 4.2343074 | Cutibacterium | 1912216 | Bacteria | Bacteria | 483 | 7.12e-132 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g12207 | i0 | 100 | 51.0766283524904 | 261 | 0 | 100 | 0 | 1 | 261 | 2290779 | 2291039 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 13331 | 483 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 21520279 | 21520279 | PRJNA534016_P_NODE_15837_length_246_cov_1.768786_g15747_i0 | PRJNA534016 | 15837 | 246 | 1.768786 | 4.35121356 | Cutibacterium | 1912216 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g15747 | i0 | 100 | 94.1382113821138 | 246 | 0 | 100 | 0 | 1 | 246 | 1140001 | 1139756 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 23158 | 455 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22795438 | 22795438 | PRJNA534016_P_NODE_12898_length_256_cov_1.683060_g12808_i0 | PRJNA534016 | 12898 | 256 | 1.68306 | 4.3086336 | Cutibacterium | 1912216 | Bacteria | Bacteria | 473 | 4.189999999999999e-129 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g12808 | i0 | 100 | 50.9609375 | 256 | 0 | 100 | 0 | 1 | 256 | 1621644 | 1621389 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 13046 | 473 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 24070274 | 24070274 | PRJNA534016_P_NODE_8719_length_289_cov_1.828704_g8629_i0 | PRJNA534016 | 8719 | 289 | 1.828704 | 5.28495456 | Rhodococcus | 1827 | Bacteria | Bacteria | 529 | 1.01e-145 | NTclustered | gi|2273853500|gb|OP012694.1| | 1831 | g8629 | i0 | 99.654 | 100 | 289 | 1 | 100 | 0 | 1 | 289 | 308 | 20 | Rhodococcus sp. strain J4038 16S ribosomal RNA gene, partial sequence | blastn | 28900 | 529 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus sp. (in: high G+C Gram-positive bacteria) | ||
| 24733352 | 24733352 | PRJNA534016_P_NODE_11500_length_267_cov_1.587629_g11410_i0 | PRJNA534016 | 11500 | 267 | 1.587629 | 4.23896943 | Rothia kristinae | 37923 | Bacteria | Bacteria | 494 | 3.38e-135 | NTclustered | gi|1943322775|gb|CP065738.1| | 37923 | g11410 | i0 | 100 | 50.940074906367 | 267 | 0 | 100 | 0 | 1 | 267 | 747417 | 747151 | Rothia kristinae strain FDAARGOS_864 chromosome, complete genome | blastn | 13601 | 494 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia kristinae | ||
| 24733533 | 24733533 | PRJNA534016_P_NODE_7000_length_319_cov_1.987805_g6910_i0 | PRJNA534016 | 7000 | 319 | 1.987805 | 6.34109795 | Schaalia cardiffensis | 181487 | Bacteria | Bacteria | 579 | 1.1099999999999996e-160 | NTclustered | gi|1672835133|gb|CP040505.1| | 888050 | g6910 | i0 | 99.373 | 193.213166144201 | 319 | 2 | 100 | 0 | 1 | 319 | 932558 | 932876 | Schaalia cardiffensis F0333 chromosome, complete genome | blastn | 61635 | 579 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Schaalia | Schaalia cardiffensis | ||
| 25344605 | 25344605 | PRJNA534016_P_NODE_12200_length_262_cov_1.269841_g12110_i0 | PRJNA534016 | 12200 | 262 | 1.269841 | 3.32698342 | Cutibacterium | 1912216 | Bacteria | Bacteria | 484 | 1.99e-132 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g12110 | i0 | 100 | 55.5076335877863 | 262 | 0 | 100 | 0 | 1 | 262 | 62088 | 62349 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 14543 | 484 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 26729179 | 26729179 | PRJNA534016_P_NODE_15081_length_248_cov_0.880000_g14991_i0 | PRJNA534016 | 15081 | 248 | 0.88 | 2.1824 | Microbacteriaceae bacterium | 1873462 | Bacteria | Bacteria | 43.5 | 0.0209 | NR | MEZ5111511.1 | 1873462 | g14991 | i0 | 48.8 | 0.991935483870968 | 41 | 21 | 49.6 | 0 | 168 | 46 | 75 | 115 | MEZ5111511.1 L,D-transpeptidase [Microbacteriaceae bacterium] | diamond | 246 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacteriaceae bacterium | |||
| 26793029 | 26793029 | PRJNA534016_P_NODE_12341_length_261_cov_0.851064_g12251_i0 | PRJNA534016 | 12341 | 261 | 0.851064 | 2.22127704 | Nocardia lasii | 1616107 | Bacteria | Bacteria | 42.7 | 0.0476 | NR | WP_378607160.1 | 1616107 | g12251 | i0 | 36.4 | 0.758620689655172 | 66 | 41 | 75.9 | 1 | 1 | 198 | 60 | 124 | WP_378607160.1 DAK2 domain-containing protein [Nocardia lasii] | diamond | 198 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Nocardia | Nocardia lasii | ||
| 26934491 | 26934491 | PRJNA534016_P_NODE_12502_length_259_cov_2.387097_g12412_i0 | PRJNA534016 | 12502 | 259 | 2.387097 | 6.18258123 | root | 1 | Root_unresolved | Root_unresolved | 43.1 | 0.0326 | NR | WP_328611704.1 | 2975955 | g12412 | i0 | 42.9 | 2.29343629343629 | 42 | 24 | 48.6 | 0 | 7 | 132 | 273 | 314 | WP_328611704.1 tachylectin-related carbohydrate-binding protein [Amycolatopsis sp. NBC_00345] | diamond | 594 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Amycolatopsis sp. NBC_00345 | ||
| 27583206 | 27583206 | PRJNA534016_P_NODE_10104_length_278_cov_1.502439_g10014_i0 | PRJNA534016 | 10104 | 278 | 1.502439 | 4.17678042 | Thermoleophilia bacterium | 2026888 | Bacteria | Bacteria | 113 | 4.5400000000000005e-27 | NR | MCB0878198.1 | 2026888 | g10014 | i0 | 63 | 0.992805755395683 | 92 | 34 | 99.3 | 0 | 277 | 2 | 172 | 263 | MCB0878198.1 hypothetical protein [Thermoleophilia bacterium] | diamond | 276 | 113 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Thermoleophilia bacterium | |||||
| 27913828 | 27913828 | PRJNA534016_P_NODE_16465_length_245_cov_0.895349_g16375_i0 | PRJNA534016 | 16465 | 245 | 0.895349 | 2.19360505 | Micrococcus | 1269 | Bacteria | Bacteria | 48.5 | 2.42e-4 | NR | WP_235186525.1 | 1270 | g16375 | i0 | 48.4 | 5.31428571428571 | 62 | 32 | 75.9 | 0 | 58 | 243 | 132 | 193 | WP_235186525.1 rhomboid family intramembrane serine protease, partial [Micrococcus luteus] | diamond | 1302 | 48.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 27962180 | 27962180 | PRJNA534016_P_NODE_15625_length_247_cov_0.885057_g15535_i0 | PRJNA534016 | 15625 | 247 | 0.885057 | 2.18609079 | Streptomyces brasiliscabiei | 2736302 | Bacteria | Bacteria | 122 | 3.6e-34 | NR | WP_336543724.1 | 2736302 | g15535 | i0 | 86.8 | 0.825910931174089 | 68 | 9 | 82.6 | 0 | 205 | 2 | 1 | 68 | WP_336543724.1 hypothetical protein, partial [Streptomyces brasiliscabiei] | diamond | 204 | 122 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces brasiliscabiei | ||
| 27993885 | 27993885 | PRJNA534016_P_NODE_15225_length_248_cov_0.880000_g15135_i0 | PRJNA534016 | 15225 | 248 | 0.88 | 2.1824 | Flaviflexus sp. | 1969482 | Bacteria | Bacteria | 49.7 | 1.24e-4 | NR | WP_371683592.1 | 1969482 | g15135 | i0 | 44 | 0.604838709677419 | 50 | 28 | 60.5 | 0 | 247 | 98 | 131 | 180 | WP_371683592.1 dephospho-CoA kinase [Flaviflexus sp.] | diamond | 150 | 49.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Flaviflexus | Flaviflexus sp. | ||
| 28846092 | 28846092 | PRJNA534016_P_NODE_14648_length_249_cov_0.875000_g14558_i0 | PRJNA534016 | 14648 | 249 | 0.875 | 2.17875 | Micrococcus luteus | 1270 | Bacteria | Bacteria | 42.4 | 0.0411 | NR | WP_010079823.1 | 1270 | g14558 | i0 | 48.3 | 2.09638554216867 | 58 | 30 | 69.9 | 0 | 8 | 181 | 100 | 157 | WP_010079823.1 GntR family transcriptional regulator [Micrococcus luteus] | diamond | 522 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 29618594 | 29618594 | PRJNA534016_P_NODE_17450_length_243_cov_0.905882_g17360_i0 | PRJNA534016 | 17450 | 243 | 0.905882 | 2.20129326 | Mycobacteroides | 670516 | Bacteria | Bacteria | 43.1 | 0.0255 | NR | WP_076984139.1 | 36809 | g17360 | i0 | 37.5 | 3.83950617283951 | 64 | 40 | 79 | 0 | 9 | 200 | 235 | 298 | WP_076984139.1 ParB/RepB/Spo0J family partition protein [Mycobacteroides abscessus] | diamond | 933 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacteroides | Mycobacteroides abscessus | ||
| 30882552 | 30882552 | PRJNA534016_P_NODE_13474_length_252_cov_0.860335_g13384_i0 | PRJNA534016 | 13474 | 252 | 0.860335 | 2.1680442 | Streptomyces | 1883 | Bacteria | Bacteria | 43.9 | 0.00609 | NR | WP_406485910.1 | 1923 | g13384 | i0 | 48.4 | 2.21428571428571 | 31 | 16 | 36.9 | 0 | 139 | 231 | 70 | 100 | WP_406485910.1 hypothetical protein [Streptomyces phaeochromogenes] | diamond | 558 | 43.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces phaeochromogenes | ||
| 30930922 | 30930922 | PRJNA534016_P_NODE_14774_length_249_cov_0.875000_g14684_i0 | PRJNA534016 | 14774 | 249 | 0.875 | 2.17875 | Microlunatus sp. | 39595 | Bacteria | Bacteria | 43.1 | 0.0275 | NR | HEU5483734.1 | 39595 | g14684 | i0 | 43.1 | 0.867469879518072 | 72 | 41 | 86.7 | 0 | 27 | 242 | 175 | 246 | HEU5483734.1 acetylxylan esterase [Microlunatus sp.] | diamond | 216 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Microlunatus | Microlunatus sp. | ||
| 31057605 | 31057605 | PRJNA534016_P_NODE_18095_length_241_cov_1.833333_g18005_i0 | PRJNA534016 | 18095 | 241 | 1.833333 | 4.41833253 | unclassified Streptomyces | 2593676 | Bacteria | Bacteria | 42.7 | 0.0359 | NR | WP_412492569.1 | 2593676 | g18005 | i0 | 40 | 1.05809128630705 | 85 | 42 | 97.1 | 4 | 241 | 8 | 348 | 430 | WP_412492569.1 MULTISPECIES: SigB/SigF/SigG family RNA polymerase sigma factor [unclassified Streptomyces] | diamond | 255 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | |||
| 31324981 | 31324981 | PRJNA534016_P_NODE_15615_length_247_cov_0.885057_g15525_i0 | PRJNA534016 | 15615 | 247 | 0.885057 | 2.18609079 | Micrococcaceae | 1268 | Bacteria | Bacteria | 52 | 2.06e-5 | NR | WP_267895940.1 | 1646 | g15525 | i0 | 59.6 | 37.4574898785425 | 52 | 21 | 63.2 | 0 | 37 | 192 | 22 | 73 | WP_267895940.1 translation initiation factor IF-3 [Renibacterium salmoninarum] | diamond | 9252 | 52 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Renibacterium | Renibacterium salmoninarum | ||
| 31419891 | 31419891 | PRJNA534016_P_NODE_14596_length_249_cov_0.875000_g14506_i0 | PRJNA534016 | 14596 | 249 | 0.875 | 2.17875 | root | 1 | Root_unresolved | Root_unresolved | 59.7 | 3.25e-9 | NR | MES8397350.1 | 1747 | g14506 | i0 | 47.9 | 7.26506024096386 | 73 | 31 | 80.7 | 3 | 231 | 31 | 42 | 113 | MES8397350.1 hypothetical protein [Cutibacterium acnes] | diamond | 1809 | 60.1 | 0.993344425956739 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 32116008 | 32116008 | PRJNA534016_P_NODE_8198_length_296_cov_1.914798_g8108_i0 | PRJNA534016 | 8198 | 296 | 1.914798 | 5.66780208 | root | 1 | Root_unresolved | Root_unresolved | 75.9 | 9.54e-15 | NR | WP_355353866.1 | 2593676 | g8108 | i0 | 87.8 | 0.831081081081081 | 41 | 5 | 41.6 | 0 | 1 | 123 | 128 | 168 | WP_355353866.1 MULTISPECIES: peptidylprolyl isomerase [unclassified Streptomyces] | diamond | 246 | 75.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | |||
| 32291212 | 32291212 | PRJNA534016_P_NODE_15719_length_247_cov_0.885057_g15629_i0 | PRJNA534016 | 15719 | 247 | 0.885057 | 2.18609079 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 121 | 9.239999999999999e-30 | NR | WP_394268295.1 | 1528099 | g15629 | i0 | 100 | 0.765182186234818 | 63 | 0 | 76.5 | 0 | 245 | 57 | 473 | 535 | WP_394268295.1 hypothetical protein [Lawsonella clevelandensis] | diamond | 189 | 121 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 32369258 | 32369258 | PRJNA534016_P_NODE_11619_length_266_cov_1.637306_g11529_i0 | PRJNA534016 | 11619 | 266 | 1.637306 | 4.35523396 | Actinomycetes | 1760 | Bacteria | Bacteria | 52 | 2.26e-6 | NR | WP_247049984.1 | 2932773 | g11529 | i0 | 43.5 | 9.05639097744361 | 69 | 30 | 67.7 | 1 | 249 | 70 | 5 | 73 | WP_247049984.1 phosphopantetheine-binding protein [Amycolatopsis sp. WQ 127309] | diamond | 2409 | 52 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Amycolatopsis sp. WQ 127309 | ||
| 32827444 | 32827444 | PRJNA534016_P_NODE_12380_length_260_cov_2.048128_g12290_i0 | PRJNA534016 | 12380 | 260 | 2.048128 | 5.3251328000000004 | Leifsonia aquatica | 144185 | Bacteria | Bacteria | 153 | 9e-44 | NR | WP_155829066.1 | 144185 | g12290 | i0 | 93.8 | 0.934615384615385 | 81 | 5 | 93.5 | 0 | 17 | 259 | 1 | 81 | WP_155829066.1 hypothetical protein [Leifsonia aquatica] | diamond | 243 | 153 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leifsonia | Leifsonia aquatica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;