RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA534016", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 4 ✖

tax_clade 1

  • Discoba · 4 ✖

bioproject 1

  • PRJNA534016 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18359005 18359005 PRJNA534016_P_NODE_16635_length_245_cov_0.895349_g16545_i0 PRJNA534016 16635 245 0.895349 2.19360505 Pyrenomonadales 589342 Heterolobosea other_Eukaryota 117 1.9699999999999999e-28   NR XP_044544774.1 51637 g16545 i0 75 11.7428571428571 80 20 98 0 244 5 514 593 XP_044544774.1 uncharacterized protein C9374_009028 [Naegleria lovaniensis] diamond 2877 117 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
27930638 27930638 PRJNA534016_P_NODE_17385_length_243_cov_0.905882_g17295_i0 PRJNA534016 17385 243 0.905882 2.20129326 Acrasis kona 1008807 Heterolobosea other_Eukaryota 61.2 1.16e-8   NR KAL0488113.1 1008807 g17295 i0 46.3 2.22222222222222 54 28 66.7 1 7 168 126 178 KAL0488113.1 actinin alpha [Acrasis kona] diamond 540 61.2 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28499136 28499136 PRJNA534016_P_NODE_16367_length_245_cov_0.895349_g16277_i0 PRJNA534016 16367 245 0.895349 2.19360505 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 71.2 8.04e-13   NR XP_002672291.1 5762 g16277 i0 48.8 1.00408163265306 82 38 99.2 3 244 2 84 162 XP_002672291.1 uncharacterized protein NAEGRDRAFT_72744 [Naegleria gruberi] diamond 246 71.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28593784 28593784 PRJNA534016_P_NODE_15587_length_247_cov_0.885057_g15497_i0 PRJNA534016 15587 247 0.885057 2.18609079 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 136 9.51e-37   NR XP_002673670.1 5762 g15497 i0 83.8 0.898785425101215 74 12 89.9 0 234 13 1 74 XP_002673670.1 ChacC and PUA domain-containing protein [Naegleria gruberi] diamond 222 136 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;