contig_metadata
23 rows where bioproject = "PRJNA533623" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3056728 | 3056728 | PRJNA533623_P_NODE_10463_length_725_cov_11.579819_g8892_i0 | PRJNA533623 | 10463 | 725 | 11.579819 | 83.95368775 | Thermodesulfomicrobium sp. WS | 3004129 | Bacteria | Bacteria | 499 | 2.16e-136 | NTclustered | gi|2416254156|dbj|AP027130.1| | 3004129 | g8892 | i0 | 87.822 | 13.0634482758621 | 427 | 50 | 59 | 2 | 37 | 462 | 1580290 | 1579865 | Thermodesulfomicrobium sp. WS DNA, complete genome | blastn | 9471 | 499 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfomicrobiaceae | Thermodesulfomicrobium | Thermodesulfomicrobium sp. WS | ||
| 3056765 | 3056765 | PRJNA533623_P_NODE_12223_length_673_cov_15.846405_g10587_i0 | PRJNA533623 | 12223 | 673 | 15.846405 | 106.64630565 | Thermodesulfomicrobium sp. WS | 3004129 | Bacteria | Bacteria | 165 | 8.26e-36 | NTclustered | gi|2416254156|dbj|AP027130.1| | 3004129 | g10587 | i0 | 89.13 | 1.82020802377415 | 138 | 7 | 20 | 4 | 40 | 171 | 2033805 | 2033670 | Thermodesulfomicrobium sp. WS DNA, complete genome | blastn | 1225 | 165 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfomicrobiaceae | Thermodesulfomicrobium | Thermodesulfomicrobium sp. WS | ||
| 4333257 | 4333257 | PRJNA533623_P_NODE_32184_length_396_cov_15.301493_g30413_i0 | PRJNA533623 | 32184 | 396 | 15.301493 | 60.59391228 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 122 | 2.85e-23 | NTclustered | gi|2108083302|gb|CP070746.1| | 2044940 | g30413 | i0 | 96 | 51.8106060606061 | 75 | 3 | 19 | 0 | 73 | 147 | 3291005 | 3290931 | MAG: Desulfobacterales bacterium isolate bin36 chromosome | blastn | 20517 | 122 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 4334243 | 4334243 | PRJNA533623_P_NODE_78444_length_196_cov_5.348148_g76663_i0 | PRJNA533623 | 78444 | 196 | 5.348148 | 10.48237008 | Maridesulfovibrio sp. | 2795000 | Bacteria | Bacteria | 121 | 4.579999999999999e-23 | NTclustered | gi|2621784475|emb|OY780933.1| | 2795000 | g76663 | i0 | 86.364 | 4.22959183673469 | 110 | 15 | 56 | 0 | 86 | 195 | 1291030 | 1290921 | MAG: Maridesulfovibrio sp. isolate 689ab4ac-13ae-4e01-b39b-c4f5232e5781 genome assembly, chromosome: 1 | blastn | 829 | 121 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Maridesulfovibrio | Maridesulfovibrio sp. | ||
| 4946000 | 4946000 | PRJNA533623_P_NODE_32704_length_392_cov_19.619335_g30933_i0 | PRJNA533623 | 32704 | 392 | 19.619335 | 76.9077932 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 422 | 2.48e-113 | NTclustered | gi|779731694|gb|CP010430.1| | 35554 | g30933 | i0 | 87.466 | 49.1020408163265 | 367 | 45 | 93 | 1 | 19 | 384 | 845899 | 846265 | Geobacter sulfurreducens strain AM-1 genome | blastn | 19248 | 422 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 15146038 | 15146038 | PRJNA533623_P_NODE_4672_length_1044_cov_13.003052_g3513_i0 | PRJNA533623 | 4672 | 1044 | 13.003052 | 135.75186288 | Desulfovibrio aminophilus | 81425 | Bacteria | Bacteria | 303 | 3.73e-94 | NR | WP_245560853.1 | 81425 | g3513 | i0 | 46.6 | 11.3045977011494 | 328 | 134 | 94.3 | 2 | 57 | 1040 | 58 | 344 | WP_245560853.1 potassium transporter Kup [Desulfovibrio aminophilus] | diamond | 11802 | 303 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio aminophilus | ||
| 26634529 | 26634529 | PRJNA533623_P_NODE_58121_length_261_cov_2.260000_g56341_i0 | PRJNA533623 | 58121 | 261 | 2.26 | 5.8986 | Syntrophorhabdus sp. | 2699756 | Bacteria | Bacteria | 70.1 | 1.08e-11 | NR | HQO64325.1 | 2699756 | g56341 | i0 | 59.6 | 0.597701149425287 | 52 | 21 | 59.8 | 0 | 157 | 2 | 1 | 52 | HQO64325.1 hypothetical protein [Syntrophorhabdus sp.] | diamond | 156 | 70.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophorhabdia | Syntrophorhabdales | Syntrophorhabdaceae | Syntrophorhabdus | Syntrophorhabdus sp. | ||
| 26856534 | 26856534 | PRJNA533623_P_NODE_53061_length_281_cov_2.904545_g51282_i0 | PRJNA533623 | 53061 | 281 | 2.904545 | 8.16177145 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 127 | 9.85e-33 | NR | MEW6593826.1 | 2202153 | g51282 | i0 | 64.5 | 2.97864768683274 | 93 | 32 | 98.2 | 1 | 1 | 276 | 275 | 367 | MEW6593826.1 glycosyltransferase [Thermodesulfobacteriota bacterium] | diamond | 837 | 127 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 26856542 | 26856542 | PRJNA533623_P_NODE_72821_length_211_cov_3.386667_g71040_i0 | PRJNA533623 | 72821 | 211 | 3.386667 | 7.14586737 | Desulfuromonadaceae bacterium | 2099677 | Bacteria | Bacteria | 62.8 | 2.09e-9 | NR | MDD2853091.1 | 2099677 | g71040 | i0 | 43.3 | 3.63981042654028 | 67 | 37 | 93.8 | 1 | 3 | 200 | 1170 | 1236 | MDD2853091.1 Ig-like domain-containing protein [Desulfuromonadaceae bacterium] | diamond | 768 | 62.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonadaceae bacterium | |||
| 27393985 | 27393985 | PRJNA533623_P_NODE_12263_length_672_cov_16.680851_g10626_i0 | PRJNA533623 | 12263 | 672 | 16.680851 | 112.09531872 | Desulfovibrio sp. | 885 | Bacteria | Bacteria | 49.3 | 0.00596 | NR | MBR3664478.1 | 885 | g10626 | i0 | 31.9 | 0.419642857142857 | 94 | 57 | 38.8 | 1 | 177 | 437 | 154 | 247 | MBR3664478.1 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase [Desulfovibrio sp.] | diamond | 282 | 49.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. | ||
| 27710055 | 27710055 | PRJNA533623_P_NODE_76304_length_204_cov_1.363636_g74523_i0 | PRJNA533623 | 76304 | 204 | 1.363636 | 2.78181744 | Candidatus Dadabacteria bacterium | 2080303 | Bacteria | Bacteria | 115 | 5.230000000000001e-29 | NR | KAB2822970.1 | 2080303 | g74523 | i0 | 83.9 | 0.911764705882353 | 62 | 10 | 91.2 | 0 | 204 | 19 | 31 | 92 | KAB2822970.1 MAG: hypothetical protein F9K51_07775, partial [Candidatus Dadabacteria bacterium] | diamond | 186 | 115 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium | |||||
| 28151806 | 28151806 | PRJNA533623_P_NODE_51725_length_286_cov_20.728889_g49946_i0 | PRJNA533623 | 51725 | 286 | 20.728889 | 59.28462254 | Geotalea toluenoxydans | 421624 | Bacteria | Bacteria | 67.8 | 5.76e-12 | NR | WP_243688755.1 | 421624 | g49946 | i0 | 51.6 | 0.65034965034965 | 62 | 28 | 65 | 1 | 10 | 195 | 74 | 133 | WP_243688755.1 CAP domain-containing protein [Geotalea toluenoxydans] | diamond | 186 | 67.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geotalea | Geotalea toluenoxydans | ||
| 28720026 | 28720026 | PRJNA533623_P_NODE_14107_length_627_cov_13.220848_g12422_i0 | PRJNA533623 | 14107 | 627 | 13.220848 | 82.89471696 | Syntrophobacteraceae bacterium | 2052185 | Bacteria | Bacteria | 47.4 | 0.0266 | NR | HBZ55011.1 | 2052185 | g12422 | i0 | 29.8 | 0.674641148325359 | 141 | 84 | 62.2 | 4 | 4 | 393 | 110 | 246 | HBZ55011.1 RND transporter [Syntrophobacteraceae bacterium] | diamond | 423 | 47.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacteraceae | Syntrophobacteraceae bacterium | |||
| 28972646 | 28972646 | PRJNA533623_P_NODE_34728_length_377_cov_11.968354_g32956_i0 | PRJNA533623 | 34728 | 377 | 11.968354 | 45.12069458 | Desulfobacterales bacterium HSG2 | 3055596 | Bacteria | Bacteria | 57.8 | 9.53e-7 | NR | MDM8549169.1 | 3055596 | g32956 | i0 | 37.8 | 2.06896551724138 | 90 | 50 | 66.8 | 2 | 356 | 105 | 1174 | 1263 | MDM8549169.1 response regulator [Desulfobacterales bacterium HSG2] | diamond | 780 | 57.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium HSG2 | ||||
| 29288181 | 29288181 | PRJNA533623_P_NODE_69569_length_221_cov_3.062500_g67788_i0 | PRJNA533623 | 69569 | 221 | 3.0625 | 6.768125 | Trichloromonas sp. | 3069249 | Bacteria | Bacteria | 47.8 | 4.87e-4 | NR | MDY0269059.1 | 3069249 | g67788 | i0 | 75 | 0.760180995475113 | 56 | 12 | 76 | 1 | 35 | 202 | 1144 | 1197 | MDY0269059.1 hypothetical protein [Trichloromonas sp.] | diamond | 168 | 47.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Trichloromonadaceae | Trichloromonas | Trichloromonas sp. | ||
| 29681767 | 29681767 | PRJNA533623_P_NODE_30790_length_407_cov_30.858382_g29019_i0 | PRJNA533623 | 30790 | 407 | 30.858382 | 125.59361474 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 57.8 | 3.81e-8 | NR | MDD3802449.1 | 57664 | g29019 | i0 | 65.9 | 0.604422604422604 | 41 | 14 | 30.2 | 0 | 127 | 5 | 8 | 48 | MDD3802449.1 hypothetical protein [Desulfuromonas thiophila] | diamond | 246 | 57.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonas | Desulfuromonas thiophila | ||
| 30994107 | 30994107 | PRJNA533623_P_NODE_42574_length_330_cov_8.490706_g40800_i0 | PRJNA533623 | 42574 | 330 | 8.490706 | 28.0193298 | Desulfuromonadaceae bacterium | 2099677 | Bacteria | Bacteria | 151 | 6.819999999999999e-40 | NR | MDD2365118.1 | 2099677 | g40800 | i0 | 76.3 | 1.69090909090909 | 93 | 22 | 84.5 | 0 | 306 | 28 | 1107 | 1199 | MDD2365118.1 carboxypeptidase regulatory-like domain-containing protein [Desulfuromonadaceae bacterium] | diamond | 558 | 151 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonadaceae bacterium | |||
| 31103638 | 31103638 | PRJNA533623_P_NODE_59115_length_257_cov_3.107143_g57335_i0 | PRJNA533623 | 59115 | 257 | 3.107143 | 7.98535751 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 104 | 1.39e-24 | NR | WP_260747545.1 | 2847045 | g57335 | i0 | 62.5 | 1.72762645914397 | 72 | 27 | 84 | 0 | 18 | 233 | 223 | 294 | WP_260747545.1 hypothetical protein [Geoalkalibacter halelectricus] | diamond | 444 | 105 | 0.990476190476191 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Geoalkalibacteraceae | Geoalkalibacter | Geoalkalibacter halelectricus | ||
| 31214791 | 31214791 | PRJNA533623_P_NODE_8615_length_796_cov_10.051701_g7139_i0 | PRJNA533623 | 8615 | 796 | 10.051701 | 80.01153996 | Candidatus Dadabacteria bacterium | 2080303 | Bacteria | Bacteria | 176 | 3.8999999999999986e-49 | NR | MCY4046612.1 | 2080303 | g7139 | i0 | 58.6 | 2.02010050251256 | 133 | 52 | 49.7 | 2 | 499 | 104 | 219 | 349 | MCY4046612.1 radical SAM protein [Candidatus Dadabacteria bacterium] | diamond | 1608 | 176 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium | |||||
| 31752824 | 31752824 | PRJNA533623_P_NODE_45737_length_314_cov_7.747036_g43961_i0 | PRJNA533623 | 45737 | 314 | 7.747036 | 24.32569304 | Desulfuromonas thiophila | 57664 | Bacteria | Bacteria | 92 | 4.43e-22 | NR | MDD3802161.1 | 57664 | g43961 | i0 | 74.2 | 0.592356687898089 | 62 | 16 | 59.2 | 0 | 30 | 215 | 6 | 67 | MDD3802161.1 hypothetical protein [Desulfuromonas thiophila] | diamond | 186 | 92 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonas | Desulfuromonas thiophila | ||
| 32242780 | 32242780 | PRJNA533623_P_NODE_50438_length_292_cov_4.103896_g48659_i0 | PRJNA533623 | 50438 | 292 | 4.103896 | 11.98337632 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 101 | 1.21e-25 | NR | HFC97381.1 | 999894 | g48659 | i0 | 57.6 | 4.23287671232877 | 85 | 35 | 86.3 | 1 | 292 | 41 | 4 | 88 | HFC97381.1 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family [Thermosulfurimonas dismutans] | diamond | 1236 | 101 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteria | Thermodesulfobacteriales | Thermodesulfobacteriaceae | Thermosulfurimonas | Thermosulfurimonas dismutans | ||
| 32653067 | 32653067 | PRJNA533623_P_NODE_14140_length_626_cov_22.240708_g12455_i0 | PRJNA533623 | 14140 | 626 | 22.240708 | 139.22683208 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 93.6 | 8.43e-19 | NR | WP_013906783.1 | 171695 | g12455 | i0 | 63.6 | 9.80511182108626 | 77 | 27 | 36.9 | 1 | 525 | 295 | 3 | 78 | WP_013906783.1 DnaJ C-terminal domain-containing protein [Thermodesulfatator indicus] | diamond | 6138 | 94.4 | 0.991525423728813 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteria | Thermodesulfobacteriales | Thermodesulfatatoraceae | Thermodesulfatator | Thermodesulfatator indicus | ||
| 32795647 | 32795647 | PRJNA533623_P_NODE_32080_length_397_cov_9.949405_g30309_i0 | PRJNA533623 | 32080 | 397 | 9.949405 | 39.49913785 | Desulfobulbaceae bacterium | 2053307 | Bacteria | Bacteria | 43.9 | 0.0424 | NR | MCP4340736.1 | 2053307 | g30309 | i0 | 48.8 | 0.324937027707809 | 43 | 21 | 32.5 | 1 | 356 | 228 | 107 | 148 | MCP4340736.1 ankyrin repeat domain-containing protein [Desulfobulbaceae bacterium] | diamond | 129 | 43.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;