RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA533623" and tax_phylum = "Cryptomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA533623 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3056844 3056844 PRJNA533623_P_NODE_15483_length_599_cov_24.174721_g13775_i0 PRJNA533623 15483 599 24.174721 144.80657879 Rozella allomycis CSF55 988480 Fungi Fungi 244 3.34e-76   NR EPZ32623.1 988480 g13775 i0 74.7 0.791318864774624 158 40 79.1 0 109 582 250 407 EPZ32623.1 3-ketoacyl-CoA thiolase A, peroxisomal [Rozella allomycis CSF55] diamond 474 244 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29351521 29351521 PRJNA533623_P_NODE_16049_length_588_cov_11.931689_g14334_i0 PRJNA533623 16049 588 11.931689 70.15833132 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 110 2.64e-24   NR PJF19551.1 1246581 g14334 i0 56.8 0.903061224489796 95 38 46.9 1 291 16 451 545 PJF19551.1 ATP-dependent RNA helicase Dbp5 [Paramicrosporidium saccamoebae] diamond 531 110 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;