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contig_metadata

25 rows where bioproject = "PRJNA533623" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 25 ✖

tax_kingdom 1

bioproject 1

  • PRJNA533623 · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2393377 2393377 PRJNA533623_P_NODE_41482_length_336_cov_4.992727_g39708_i0 PRJNA533623 41482 336 4.992727 16.77556272 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 101 5.93e-24   NR HRF59462.1 2682144 g39708 i0 50.9 0.964285714285714 108 53 96.4 0 335 12 115 222 HRF59462.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 324 101 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
3057511 3057511 PRJNA533623_P_NODE_44163_length_322_cov_9.264368_g42389_i0 PRJNA533623 44163 322 9.264368 29.83126496 Fimbriimonas sp. 1936159 Bacteria Bacteria 287 7.610000000000001e-73   NTclustered gi|2778022393|emb|OZ123194.1| 1936159 g42389 i0 87.402 271.645962732919 254 27 78 4 19 269 1690473 1690222 MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 blastn 87470 287 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
5609583 5609583 PRJNA533623_P_NODE_11125_length_704_cov_15.682737_g9527_i0 PRJNA533623 11125 704 15.682737 110.40646848 Armatimonadetes bacterium Uphvl-Ar1 2004467 Bacteria Bacteria 957 0   NTclustered gi|1199098093|gb|CP021423.1| 2004467 g9527 i0 92.868 0.936079545454545 659 47 94 0 23 681 2369048 2368390 Armatimonadetes bacterium Uphvl-Ar1 genome blastn 659 957 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Uphvl-Ar1
10046334 10046334 PRJNA533623_P_NODE_35168_length_374_cov_15.939297_g33396_i0 PRJNA533623 35168 374 15.939297 59.61297078 Armatimonadota 67819 Bacteria Bacteria 390 6.64e-104   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g33396 i0 94.862 167.823529411765 253 8 66 3 29 276 35702 35450 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 62766 390 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus
16420589 16420589 PRJNA533623_P_NODE_2873_length_1274_cov_92.964551_g1981_i0 PRJNA533623 2873 1274 92.964551 1184.36837974 Fimbriimonas 1005038 Bacteria Bacteria 1110 0   NTclustered gi|663071213|gb|CP007139.1| 661478 g1981 i0 93.054 71.9065934065934 763 48 83 5 1 761 874997 874238 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 91609 1110 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
17696067 17696067 PRJNA533623_P_NODE_68774_length_224_cov_1.276074_g66993_i0 PRJNA533623 68774 224 1.276074 2.85840576 Fimbriimonas 1005038 Bacteria Bacteria 215 2.4e-51   NTclustered gi|663071213|gb|CP007139.1| 661478 g66993 i0 98.361 138.78125 122 2 82 0 81 202 27111 27232 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 31087 215 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
18358059 18358059 PRJNA533623_P_NODE_42835_length_329_cov_3.365672_g41061_i0 PRJNA533623 42835 329 3.365672 11.07306088 Chthonomonadales bacterium 2282151 Bacteria Bacteria 118 7.149999999999999e-31   NR HSV73447.1 2282151 g41061 i0 58 0.911854103343465 100 41 91.2 1 24 323 96 194 HSV73447.1 hypothetical protein [Chthonomonadales bacterium] diamond 300 118 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
21520049 21520049 PRJNA533623_P_NODE_52677_length_282_cov_13.529412_g50898_i0 PRJNA533623 52677 282 13.529412 38.15294184 Fimbriimonas 1005038 Bacteria Bacteria 145 4.1699999999999995e-30   NTclustered gi|663071213|gb|CP007139.1| 661478 g50898 i0 83.544 9.66666666666667 158 22 62 4 63 218 413243 413088 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 2726 145 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
24069729 24069729 PRJNA533623_P_NODE_24239_length_469_cov_17.281863_g22478_i0 PRJNA533623 24239 469 17.281863 81.05193747 Fimbriimonas 1005038 Bacteria Bacteria 529 1.7299999999999993e-145   NTclustered gi|663071213|gb|CP007139.1| 661478 g22478 i0 88.409 174.648187633262 440 49 94 2 8 446 28729 29167 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 81910 529 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
24732016 24732016 PRJNA533623_P_NODE_22600_length_487_cov_50.715962_g20846_i0 PRJNA533623 22600 487 50.715962 246.98673494 Fimbriimonas 1005038 Bacteria Bacteria 111 1.62e-25   NR MBI1757324.1 1005039 g20846 i0 63.2 3.25872689938398 87 32 53.6 0 10 270 319 405 MBI1757324.1 fumarylacetoacetase [Fimbriimonas ginsengisoli] diamond 1587 111 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26824750 26824750 PRJNA533623_P_NODE_25201_length_459_cov_4.444724_g23436_i0 PRJNA533623 25201 459 4.444724 20.40128316 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 95.1 1.75e-19   NR MFN7161609.1 2682145 g23436 i0 56.8 1.71895424836601 88 38 57.5 0 159 422 1 88 MFN7161609.1 malate synthase A [Fimbriimonadales bacterium] diamond 789 95.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
27520140 27520140 PRJNA533623_P_NODE_79043_length_193_cov_2.257576_g77262_i0 PRJNA533623 79043 193 2.257576 4.35712168 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 82 2.8e-16   NR MEQ1822690.1 2682144 g77262 i0 64.4 1.83419689119171 59 18 91.7 1 189 13 1450 1505 MEQ1822690.1 PQQ-binding-like beta-propeller repeat protein [Fimbriimonadaceae bacterium] diamond 354 82 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27772935 27772935 PRJNA533623_P_NODE_64264_length_239_cov_1.095506_g62483_i0 PRJNA533623 64264 239 1.095506 2.61825934 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 71.2 3.28e-12   NR MEQ1822690.1 2682144 g62483 i0 53.2 0.96652719665272 77 26 96.7 2 232 2 1513 1579 MEQ1822690.1 PQQ-binding-like beta-propeller repeat protein [Fimbriimonadaceae bacterium] diamond 231 71.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
28151814 28151814 PRJNA533623_P_NODE_59225_length_257_cov_1.076531_g57445_i0 PRJNA533623 59225 257 1.076531 2.76668467 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 52 2.27e-5   NR MFN3730435.1 2682144 g57445 i0 54.5 0.385214007782101 33 15 38.5 0 256 158 299 331 MFN3730435.1 replication-relaxation family protein [Fimbriimonadaceae bacterium] diamond 99 52 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
28499125 28499125 PRJNA533623_P_NODE_73367_length_210_cov_2.033557_g71586_i0 PRJNA533623 73367 210 2.033557 4.2704697 Armatimonas sp. 1872638 Bacteria Bacteria 87 3.58e-19   NR WP_309687503.1 1872638 g71586 i0 68.9 0.871428571428571 61 19 87.1 0 208 26 149 209 WP_309687503.1 HEAT repeat domain-containing protein [Armatimonas sp.] diamond 183 87 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
28625389 28625389 PRJNA533623_P_NODE_10807_length_714_cov_9.658499_g9223_i0 PRJNA533623 10807 714 9.658499 68.96168286 Armatimonadota bacterium 2033014 Bacteria Bacteria 200 7.199999999999999e-57   NR HEX2950789.1 2033014 g9223 i0 49.2 0.819327731092437 195 99 81.9 0 676 92 374 568 HEX2950789.1 beta-galactosidase family protein [Armatimonadota bacterium] diamond 585 200 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28909093 28909093 PRJNA533623_P_NODE_57008_length_265_cov_4.696078_g55228_i0 PRJNA533623 57008 265 4.696078 12.4446067 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 52 2.68e-5   NR MEJ5170090.1 2682145 g55228 i0 47.6 0.713207547169811 63 32 70.2 1 11 196 401 463 MEJ5170090.1 efflux RND transporter periplasmic adaptor subunit [Fimbriimonadales bacterium] diamond 189 52 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
29951410 29951410 PRJNA533623_P_NODE_16831_length_573_cov_9.779297_g15107_i0 PRJNA533623 16831 573 9.779297 56.03537181 Armatimonadota bacterium 2033014 Bacteria Bacteria 151 8.08e-40   NR HEX2949730.1 2033014 g15107 i0 56.6 0.712041884816754 136 59 71.2 0 501 94 3 138 HEX2949730.1 sugar porter family MFS transporter [Armatimonadota bacterium] diamond 408 151 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30140544 30140544 PRJNA533623_P_NODE_22432_length_489_cov_55.661215_g20678_i0 PRJNA533623 22432 489 55.661215 272.18334135 Armatimonadota bacterium 2033014 Bacteria Bacteria 269 4.6599999999999994e-88   NR MBC8136138.1 2033014 g20678 i0 84.7 0.96319018404908 157 24 96.3 0 488 18 81 237 MBC8136138.1 G5 domain-containing protein [Armatimonadota bacterium] diamond 471 269 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30709584 30709584 PRJNA533623_P_NODE_41114_length_338_cov_6.021661_g39340_i0 PRJNA533623 41114 338 6.021661 20.35321418 Armatimonadia bacterium 2663015 Bacteria Bacteria 49.3 5.12e-4   NR MBD3177635.1 2663015 g39340 i0 75.7 0.328402366863905 37 6 31.1 2 115 11 201 236 MBD3177635.1 protein translocase subunit SecF [Armatimonadia bacterium] diamond 111 49.3 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
31373501 31373501 PRJNA533623_P_NODE_12216_length_673_cov_59.408497_g10580_i0 PRJNA533623 12216 673 59.408497 399.81918481 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 132 7.3799999999999984e-34   NR HZO87177.1 2739509 g10580 i0 60.6 0.463595839524517 104 41 46.4 0 408 97 146 249 HZO87177.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 312 132 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
31500036 31500036 PRJNA533623_P_NODE_336_length_2669_cov_31.057899_g197_i0 PRJNA533623 336 2669 31.057899 828.93532431 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 370 5.55e-117   NR MFN3730435.1 2682144 g197 i0 62.7 0.355189209441738 316 113 35.5 1 1711 2658 3 313 MFN3730435.1 replication-relaxation family protein [Fimbriimonadaceae bacterium] diamond 948 370 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
31784374 31784374 PRJNA533623_P_NODE_11297_length_699_cov_53.636364_g9694_i0 PRJNA533623 11297 699 53.636364 374.91818436 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 140 1.12e-37   NR MFN3730433.1 2682144 g9694 i0 67.3 0.459227467811159 107 35 45.9 0 325 5 31 137 MFN3730433.1 helix-turn-helix domain-containing protein [Fimbriimonadaceae bacterium] diamond 321 140 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
32227658 32227658 PRJNA533623_P_NODE_35778_length_370_cov_26.443366_g34006_i0 PRJNA533623 35778 370 26.443366 97.8404542 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 92.8 1.28e-19   NR MFN3730435.1 2682144 g34006 i0 58.3 0.583783783783784 72 30 58.4 0 144 359 242 313 MFN3730435.1 replication-relaxation family protein [Fimbriimonadaceae bacterium] diamond 216 92.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
32858841 32858841 PRJNA533623_P_NODE_74860_length_207_cov_1.335616_g73079_i0 PRJNA533623 74860 207 1.335616 2.76472512 Armatimonadota bacterium 2033014 Bacteria Bacteria 135 5.029999999999998e-35   NR MBC8134747.1 2033014 g73079 i0 91.2 0.985507246376812 68 6 98.6 0 206 3 483 550 MBC8134747.1 hypothetical protein [Armatimonadota bacterium] diamond 204 135 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;