RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA533623", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 9 ✖

tax_kingdom 1

  • Orthornavirae · 9 ✖

bioproject 1

  • PRJNA533623 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3058073 3058073 PRJNA533623_P_NODE_70823_length_217_cov_4.916667_g69042_i0 PRJNA533623 70823 217 4.916667 10.66916739 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.019   NTclustered gi|1995060321|gb|MN450069.1| 12164 g69042 i0 100 0.129032258064516 28 0 13 0 190 217 43 16 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
4333354 4333354 PRJNA533623_P_NODE_35944_length_369_cov_15.126623_g34172_i0 PRJNA533623 35944 369 15.126623 55.81723887 Carlavirus latensdianthi 3427766 Viruses Viruses 71.3 9.68e-8   NTclustered gi|1995060321|gb|MN450069.1| 12164 g34172 i0 89.474 0.479674796747967 57 4 15 2 1 56 13 68 Carnation latent virus isolate KL, complete genome blastn 177 71.3 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
4333585 4333585 PRJNA533623_P_NODE_46184_length_312_cov_4.872510_g44408_i0 PRJNA533623 46184 312 4.87251 15.2022312 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g44408 i0 100 0.455128205128205 30 0 10 0 283 312 42 13 Carnation latent virus isolate KL, complete genome blastn 142 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
5610774 5610774 PRJNA533623_P_NODE_62425_length_245_cov_3.385870_g60644_i0 PRJNA533623 62425 245 3.38587 8.2953815 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.022   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g60644 i0 100 0.114285714285714 28 0 11 0 218 245 35 8 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
9434753 9434753 PRJNA533623_P_NODE_3708_length_1146_cov_45.283871_g2184_i2 PRJNA533623 3708 1146 45.283871 518.95316166 Jujube closterovirus 1 3043313 Viruses Viruses 60.2 6.98e-4   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g2184 i2 97.143 0.0305410122164049 35 1 3 0 1095 1129 40 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 35 60.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
13260756 13260756 PRJNA533623_P_NODE_60611_length_251_cov_26.005263_g58831_i0 PRJNA533623 60611 251 26.005263 65.27321013 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g58831 i0 100 0.561752988047809 29 0 12 0 223 251 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
20908179 20908179 PRJNA533623_P_NODE_25637_length_454_cov_49.908397_g23869_i0 PRJNA533623 25637 454 49.908397 226.58412238 Allexivirus deltallii 3433711 Viruses Viruses 769 0   NTclustered gi|940785373|gb|KR819505.1| 12430 g23869 i0 98.845 83.7334801762115 433 2 95 2 1 430 8414 7982 Garlic virus D isolate Mesi 13, complete genome blastn 38015 769 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus deltallii
20909179 20909179 PRJNA533623_P_NODE_71077_length_216_cov_13.806452_g69296_i0 PRJNA533623 71077 216 13.806452 29.82193632 Bromovirus BMV 3427622 Viruses Viruses 342 1.0099999999999999e-89   NTclustered gi|2329659869|gb|OK558648.1| 12302 g69296 i0 98.454 29.6388888888889 194 3 90 0 1 194 1194 1001 Brome mosaic virus isolate VRS-315 ORF1 and ORF2 genes, complete cds blastn 6402 342 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV
20909417 20909417 PRJNA533623_P_NODE_9477_length_761_cov_6.132857_g7945_i0 PRJNA533623 9477 761 6.132857 46.67104177 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.021   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g7945 i0 100 0.038107752956636 29 0 4 0 733 761 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;