RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA533623", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA533623 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13259751 13259751 PRJNA533623_P_NODE_16791_length_574_cov_4.853801_g15067_i0 PRJNA533623 16791 574 4.853801 27.86081774 Vavraia culicis 103449 Fungi Fungi 97.1 2.58e-15   NTclustered gi|667636757|ref|XR_552273.1| 948595 g15067 i0 82.301 0.196864111498258 113 19 20 1 252 364 1572 1461 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 113 97.1 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
16420489 16420489 PRJNA533623_P_NODE_1513_length_1642_cov_43.762176_g951_i0 PRJNA533623 1513 1642 43.762176 718.57492992 Opisthokonta 33154 Fungi Fungi 93.5 9.96e-14   NTclustered gi|68301725|gb|DQ057525.1| 278021 g951 i0 96.429 2.90012180267966 56 2 3 0 1145 1200 758 813 Antonospora locustae clone 1p20 mRNA sequence blastn 4762 93.5 1 Eukaryota Opisthokonta Fungi Microsporidia       Antonospora Antonospora locustae
23458499 23458499 PRJNA533623_P_NODE_31199_length_404_cov_15.344023_g29428_i0 PRJNA533623 31199 404 15.344023 61.98985292 Trachipleistophora hominis 72359 Fungi Fungi 84.7 1.48e-16   NR ELQ74545.1 72359 g29428 i0 50.7 0.556930693069307 75 37 55.7 0 377 153 137 211 ELQ74545.1 LTR Retrotransposon [Trachipleistophora hominis] diamond 225 84.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Trachipleistophora Trachipleistophora hominis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;