RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA533623", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA533623 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4946305 4946305 PRJNA533623_P_NODE_68844_length_223_cov_11.956790_g67063_i0 PRJNA533623 68844 223 11.95679 26.6636417 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 361 2.9e-95   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g67063 i0 99.005 6.34977578475336 201 2 90 0 23 223 210 410 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 1416 361 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
13261053 13261053 PRJNA533623_P_NODE_74651_length_207_cov_5.671233_g72870_i0 PRJNA533623 74651 207 5.671233 11.73945231 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 292 9.8e-75   NTclustered gi|1402550488|gb|MH488774.1| 2231170 g72870 i0 99.383 69.5845410628019 162 0 78 1 1 161 1895 2056 Guttulinopsis rogosa isolate FOLDEDA sequence blastn 14404 292 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
28404243 28404243 PRJNA533623_P_NODE_70026_length_220_cov_1.408805_g68245_i0 PRJNA533623 70026 220 1.408805 3.099371 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 62.4 3.22e-9   NR MES1917203.1 1215613 g68245 i0 40.3 0.981818181818182 72 42 96.8 1 219 7 58 129 MES1917203.1 hypothetical protein [Cercozoa sp. M6MM] diamond 216 62.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30804458 30804458 PRJNA533623_P_NODE_37854_length_358_cov_2.457912_g36082_i0 PRJNA533623 37854 358 2.457912 8.79932496 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 68.9 5.38e-11   NR MES1909125.1 1215613 g36082 i0 40 1.25698324022346 75 45 62.8 0 133 357 157 231 MES1909125.1 hypothetical protein [Cercozoa sp. M6MM] diamond 450 68.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;