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contig_metadata

11 rows where bioproject = "PRJNA533623", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 11 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 11 ✖

bioproject 1

  • PRJNA533623 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1117957 1117957 PRJNA533623_P_NODE_59141_length_257_cov_2.392857_g57361_i0 PRJNA533623 59141 257 2.392857 6.14964249 root 1 Root_unresolved Root_unresolved 433 7.15e-117   NTclustered gi|226473461|emb|FN315684.1| 6182 g57361 i0 100 91.0505836575876 234 0 91 0 24 257 437 204 Schistosoma japonicum isolate Anhui full length mRNA clone SJFCA3765.008|FSA001-P00027-C16, complete sequence blastn 23400 433 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
3057317 3057317 PRJNA533623_P_NODE_34823_length_377_cov_0.987342_g33051_i0 PRJNA533623 34823 377 0.987342 3.72227934 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 52.8 0.036   NTclustered gi|393794191|dbj|AK388788.1| 6161 g33051 i0 100 0.0742705570291777 28 0 7 0 267 294 1772 1799 Dugesia japonica cDNA, clone: Dj_aH_000_02497HH.full, full-insert sequence, expressed in adult head blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
3057596 3057596 PRJNA533623_P_NODE_48043_length_303_cov_3.561983_g46264_i0 PRJNA533623 48043 303 3.561983 10.79280849 Schistosoma rodhaini 6188 Platyhelminthes Platyhelminthes 69.7 5.82e-12   NR CAH8532442.1 6188 g46264 i0 60 0.495049504950495 50 19 49.5 1 79 228 34 82 CAH8532442.1 unnamed protein product [Schistosoma rodhaini] diamond 150 69.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma rodhaini
3669440 3669440 PRJNA533623_P_NODE_69103_length_223_cov_1.253086_g67322_i0 PRJNA533623 69103 223 1.253086 2.79438178 Prorhynchidae 6170 Platyhelminthes Platyhelminthes 65.8 2.54e-6   NTclustered gi|588313896|gb|KC869854.1| 6172 g67322 i0 93.182 5.10313901345291 44 3 20 0 22 65 2167 2210 Geocentrophora baltica 28S ribosomal RNA gene, partial sequence blastn 1138 65.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Lecithoepitheliata Prorhynchidae Geocentrophora Geocentrophora baltica
11984539 11984539 PRJNA533623_P_NODE_10570_length_721_cov_14.746970_g8997_i0 PRJNA533623 10570 721 14.74697 106.3256537 root 1 Root_unresolved Root_unresolved 252 9.289999999999999e-82   NR PAA80639.1 282301 g8997 i0 67.6 9.14563106796117 179 56 73.6 2 45 575 5 183 PAA80639.1 hypothetical protein BOX15_Mlig001778g7, partial [Macrostomum lignano] diamond 6594 254 0.992125984251969 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
11985643 11985643 PRJNA533623_P_NODE_58630_length_259_cov_2.085859_g56850_i0 PRJNA533623 58630 259 2.085859 5.40237481 Didymorchis sp. Australia-DTJL-2002 216950 Platyhelminthes Platyhelminthes 73.1 1.81e-8   NTclustered gi|28273275|gb|AY157163.1| 216950 g56850 i0 88.71 0.374517374517374 62 4 24 3 63 123 2439 2380 Didymorchis sp. Australia-DTJL-2002 28S large subunit ribosomal RNA gene, partial sequence blastn 97 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Didymorchiidae Didymorchis Didymorchis sp. Australia-DTJL-2002
26697825 26697825 PRJNA533623_P_NODE_62941_length_243_cov_4.846154_g61160_i0 PRJNA533623 62941 243 4.846154 11.77615422 Trichobilharzia regenti 157069 Platyhelminthes Platyhelminthes 99 2.5899999999999994e-23   NR VDQ12229.1 157069 g61160 i0 63.4 1.54320987654321 71 26 87.7 0 23 235 95 165 VDQ12229.1 unnamed protein product [Trichobilharzia regenti] diamond 375 99 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia regenti
26712648 26712648 PRJNA533623_P_NODE_20081_length_521_cov_12.400000_g18335_i0 PRJNA533623 20081 521 12.4 64.604 Metazoa 33208 Platyhelminthes Platyhelminthes 82.8 7.42e-17   NR VDL93752.1 70667 g18335 i0 60 2.10748560460653 75 29 43.2 1 70 294 50 123 VDL93752.1 unnamed protein product [Schistocephalus solidus] diamond 1098 82.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Schistocephalus Schistocephalus solidus
27772920 27772920 PRJNA533623_P_NODE_18104_length_551_cov_10.940816_g16369_i0 PRJNA533623 18104 551 10.940816 60.28389616 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 74.7 6.17e-12   NR PAA65435.1 282301 g16369 i0 44.2 1.39927404718693 86 47 46.8 1 375 118 334 418 PAA65435.1 hypothetical protein BOX15_Mlig002102g1 [Macrostomum lignano] diamond 771 74.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
32259454 32259454 PRJNA533623_P_NODE_37518_length_360_cov_3.043478_g35746_i0 PRJNA533623 37518 360 3.043478 10.9565208 Echinostoma caproni 27848 Platyhelminthes Platyhelminthes 47.8 3.7e-4   NR VDP94963.1 27848 g35746 i0 47.5 1.01666666666667 61 30 50 2 282 103 42 101 VDP94963.1 unnamed protein product [Echinostoma caproni] diamond 366 47.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Echinostomatidae Echinostoma Echinostoma caproni
32575712 32575712 PRJNA533623_P_NODE_31259_length_404_cov_3.591837_g29488_i0 PRJNA533623 31259 404 3.591837 14.51102148 Paragonimus kellicotti 100269 Platyhelminthes Platyhelminthes 54.7 4.43e-6   NR KAF6777418.1 100269 g29488 i0 63.6 0.653465346534653 44 15 31.9 1 274 402 28 71 KAF6777418.1 hypothetical protein AHF37_03054 [Paragonimus kellicotti] diamond 264 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus kellicotti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;