RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA533623", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA533623 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10710015 10710015 PRJNA533623_P_NODE_1769_length_1547_cov_142.640646_g1128_i0 PRJNA533623 1769 1547 142.640646 2206.65079362 Fidelibacterota bacterium 2026760 Bacteria Bacteria 252 9.12e-74   NR UCD39061.1 2026760 g1128 i0 48.2 2.89722042663219 257 121 49.8 4 147 917 33 277 UCD39061.1 MAG: glycoside hydrolase family 88 protein [Fidelibacterota bacterium] diamond 4482 252 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31405127 31405127 PRJNA533623_P_NODE_29076_length_422_cov_6.332410_g27306_i0 PRJNA533623 29076 422 6.33241 26.7227702 Fidelibacterota bacterium 2026760 Bacteria Bacteria 45.4 0.0273   NR MDP6569653.1 2026760 g27306 i0 36.8 1.08056872037915 76 35 46.9 3 177 374 433 505 MDP6569653.1 trypsin-like peptidase domain-containing protein [Fidelibacterota bacterium] diamond 456 45.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;