RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA533623", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA533623 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27520124 27520124 PRJNA533623_P_NODE_32703_length_392_cov_20.839879_g30932_i0 PRJNA533623 32703 392 20.839879 81.69232568 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 143 2.35e-39   NR GIV55233.1 2447898 g30932 i0 90.7 0.658163265306122 86 7 65.1 1 24 278 188 273 GIV55233.1 MAG: SAM-dependent methyltransferase [Candidatus Kapaibacterium sp.] diamond 258 143 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
28246146 28246146 PRJNA533623_P_NODE_78826_length_194_cov_3.127820_g77045_i0 PRJNA533623 78826 194 3.12782 6.0679708 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 100 6.059999999999999e-23   NR GIV56405.1 2447898 g77045 i0 87.3 0.850515463917526 55 7 85.1 0 173 9 1 55 GIV56405.1 MAG: phosphoenolpyruvate-protein phosphotransferase [Candidatus Kapaibacterium sp.] diamond 165 100 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29730079 29730079 PRJNA533623_P_NODE_56870_length_266_cov_1.268293_g55090_i0 PRJNA533623 56870 266 1.268293 3.37365938 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 130 4.73e-33   NR GIV49721.1 2447898 g55090 i0 86.3 1.80451127819549 80 11 90.2 0 264 25 545 624 GIV49721.1 MAG: histidine kinase [Candidatus Kapaibacterium sp.] diamond 480 130 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;