contig_metadata
10 rows where bioproject = "PRJNA533114" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 504908 | 504908 | PRJNA533114_P_NODE_25381_length_451_cov_2.441799_g25131_i0 | PRJNA533114 | 25381 | 451 | 2.441799 | 11.01251349 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 507 | 7.76e-139 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g25131 | i0 | 88.056 | 21.5410199556541 | 427 | 51 | 95 | 0 | 1 | 427 | 427 | 1 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 9715 | 507 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 1780241 | 1780241 | PRJNA533114_P_NODE_28382_length_428_cov_2.233803_g28130_i0 | PRJNA533114 | 28382 | 428 | 2.233803 | 9.56067684 | Nolandella sp. LAK-2 | 1908693 | Tubulinea | other_Eukaryota | 182 | 1.01e-54 | NR | AFX73095.1 | 1260117 | g28130 | i0 | 64.1 | 1.99065420560748 | 142 | 51 | 99.5 | 0 | 426 | 1 | 82 | 223 | AFX73095.1 elongation factor 2 alpha, partial [Nolandella sp. LAK-2012] | diamond | 852 | 182 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Nolandella | Nolandella sp. LAK-2012 | ||
| 5609264 | 5609264 | PRJNA533114_P_NODE_7445_length_816_cov_3.896366_g7247_i0 | PRJNA533114 | 7445 | 816 | 3.896366 | 31.79434656 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 826 | 0 | NTclustered | gi|844573744|gb|KP411223.1| | 5775 | g7247 | i0 | 85.272 | 0.990196078431373 | 808 | 112 | 98 | 4 | 11 | 813 | 14 | 819 | Amoeba proteus Tom40 mRNA, complete cds | blastn | 808 | 826 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 6883233 | 6883233 | PRJNA533114_P_NODE_83806_length_265_cov_1.630208_g83554_i0 | PRJNA533114 | 83806 | 265 | 1.630208 | 4.3200512 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 191 | 4.92e-44 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g83554 | i0 | 80 | 1 | 265 | 47 | 99 | 5 | 4 | 265 | 648 | 387 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 265 | 191 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 13258754 | 13258754 | PRJNA533114_P_NODE_33471_length_397_cov_1.154321_g33219_i0 | PRJNA533114 | 33471 | 397 | 1.154321 | 4.58265437 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 394 | 5.48e-105 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g33219 | i0 | 87.246 | 0.869017632241814 | 345 | 44 | 87 | 0 | 1 | 345 | 1045 | 1389 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 345 | 394 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 18356360 | 18356360 | PRJNA533114_P_NODE_30395_length_414_cov_3.231672_g30143_i0 | PRJNA533114 | 30395 | 414 | 3.231672 | 13.37912208 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 194 | 3.18e-57 | NR | BAN33737.1 | 931554 | g30143 | i0 | 77.2 | 27.695652173913 | 123 | 28 | 89.1 | 0 | 369 | 1 | 4 | 126 | BAN33737.1 elongation factor-like protein [Copromyxa protea] | diamond | 11466 | 194 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 26807995 | 26807995 | PRJNA533114_P_NODE_61421_length_304_cov_1.398268_g61169_i0 | PRJNA533114 | 61421 | 304 | 1.398268 | 4.25073472 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 103 | 3.92e-25 | NR | ABD46563.1 | 5778 | g61169 | i0 | 58.7 | 3.19736842105263 | 75 | 31 | 74 | 0 | 225 | 1 | 2 | 76 | ABD46563.1 succinyl-diaminopimelate desuccinylase-like protein A, partial [Vermamoeba vermiformis] | diamond | 972 | 103 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 29698174 | 29698174 | PRJNA533114_P_NODE_113450_length_244_cov_0.877193_g113198_i0 | PRJNA533114 | 113450 | 244 | 0.877193 | 2.14035092 | Saccamoeba lacustris | 704142 | Tubulinea | other_Eukaryota | 106 | 7.54e-26 | NR | AFX73097.1 | 704142 | g113198 | i0 | 64.2 | 3.98360655737705 | 81 | 25 | 99.6 | 1 | 1 | 243 | 124 | 200 | AFX73097.1 elongation factor 2 alpha, partial [Saccamoeba lacustris] | diamond | 972 | 106 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba lacustris | ||
| 30488380 | 30488380 | PRJNA533114_P_NODE_11993_length_652_cov_1.770294_g11753_i0 | PRJNA533114 | 11993 | 652 | 1.770294 | 11.54231688 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 58.9 | 2.09e-6 | NR | AKN09692.1 | 5775 | g11753 | i0 | 27.6 | 0.800613496932515 | 174 | 119 | 77.8 | 3 | 635 | 129 | 3 | 174 | AKN09692.1 Tom40 [Amoeba proteus] | diamond | 522 | 58.9 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 32147585 | 32147585 | PRJNA533114_P_NODE_51178_length_330_cov_1.147860_g50926_i0 | PRJNA533114 | 51178 | 330 | 1.14786 | 3.787938 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 77.4 | 5.89e-14 | NR | AAD37351.1 | 5775 | g50926 | i0 | 45.4 | 1.74545454545455 | 97 | 51 | 88.2 | 1 | 314 | 24 | 99 | 193 | AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] | diamond | 576 | 77.4 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;