RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA533114", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Preplasmiviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA533114 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10046125 10046125 PRJNA533114_P_NODE_93808_length_251_cov_0.865169_g93556_i0 PRJNA533114 93808 251 0.865169 2.17157419 Aviadenovirus 10552 Viruses Viruses 67.6 8.12e-7   NTclustered gi|1898485168|gb|MT792736.1| 1520006 g93556 i0 93.478 13.1155378486056 46 1 18 2 127 171 22566 22522 Duck adenovirus 2 isolate HF-AH-2020, complete genome blastn 3292 67.6 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Aviadenovirus Aviadenovirus anatis
16420398 16420398 PRJNA533114_P_NODE_71013_length_285_cov_1.787736_g70761_i0 PRJNA533114 71013 285 1.787736 5.0950476 root 1 Root_unresolved Root_unresolved 58.4 5.66e-4   NTclustered gi|2327912943|gb|OL897270.1| 1907210 g70761 i0 100 4.51929824561403 31 0 11 0 15 45 131 101 Human adenovirus sp. strain HAdV/S183/Huzhou/2020/CHN hexon gene, partial cds blastn 1288 58.4 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Human adenovirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;