contig_metadata
7 rows where bioproject = "PRJNA533114", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3056211 | 3056211 | PRJNA533114_P_NODE_53343_length_324_cov_1.027888_g53091_i0 | PRJNA533114 | 53343 | 324 | 1.027888 | 3.33035712 | Nitrosopumilus ureiphilus | 1470067 | Archaea | Archaea | 52.8 | 0.03 | NTclustered | gi|1869224726|gb|CP026995.1| | 1470067 | g53091 | i0 | 100 | 0.0864197530864197 | 28 | 0 | 9 | 0 | 266 | 293 | 1490507 | 1490480 | Nitrosopumilus ureiphilus strain PS0 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrosopumilales | Nitrosopumilaceae | Nitrosopumilus | Nitrosopumilus ureiphilus | ||
| 5608217 | 5608217 | PRJNA533114_P_NODE_106645_length_246_cov_0.890173_g106393_i0 | PRJNA533114 | 106645 | 246 | 0.890173 | 2.18982558 | Candidatus Nitrosocosmicus oleophilus | 1353260 | Archaea | Archaea | 67.6 | 7.94e-7 | NTclustered | gi|937513727|gb|CP012850.1| | 1353260 | g106393 | i0 | 97.436 | 16.1463414634146 | 39 | 1 | 16 | 0 | 13 | 51 | 2551966 | 2551928 | Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome | blastn | 3972 | 67.6 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Candidatus Nitrosocosmicus | Candidatus Nitrosocosmicus oleophilus | ||
| 10046063 | 10046063 | PRJNA533114_P_NODE_37488_length_377_cov_1.444079_g37236_i0 | PRJNA533114 | 37488 | 377 | 1.444079 | 5.44417783 | Nitrosarchaeum sp. | 2026886 | Archaea | Archaea | 220 | 1.18e-65 | NR | MFB5612793.1 | 2026886 | g37236 | i0 | 88.8 | 0.994694960212202 | 125 | 14 | 99.5 | 0 | 377 | 3 | 438 | 562 | MFB5612793.1 molecular chaperone DnaK [Nitrosarchaeum sp.] | diamond | 375 | 220 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrosopumilales | Nitrosopumilaceae | Nitrosarchaeum | Nitrosarchaeum sp. | ||
| 26776390 | 26776390 | PRJNA533114_P_NODE_281_length_2425_cov_3.537415_g266_i0 | PRJNA533114 | 281 | 2425 | 3.537415 | 85.78231375 | root | 1 | Root_unresolved | Root_unresolved | 77.8 | 1.99e-10 | NR | MDE1826414.1 | 2026795 | g266 | i0 | 26.2 | 2.58927835051546 | 386 | 208 | 45.6 | 15 | 1280 | 2386 | 56 | 381 | MDE1826414.1 fibronectin type III domain-containing protein [Nitrososphaerota archaeon] | diamond | 6279 | 78.2 | 0.994884910485933 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaerota archaeon | ||||||
| 28467441 | 28467441 | PRJNA533114_P_NODE_66006_length_294_cov_1.393665_g65754_i0 | PRJNA533114 | 66006 | 294 | 1.393665 | 4.0973751 | Nitrosopumilaceae archaeon | 2202732 | Archaea | Archaea | 65.1 | 8.27e-10 | NR | NIP61579.1 | 2202732 | g65754 | i0 | 36 | 1.89795918367347 | 86 | 55 | 87.8 | 0 | 35 | 292 | 1 | 86 | NIP61579.1 aldo/keto reductase [Nitrosopumilaceae archaeon] | diamond | 558 | 65.1 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrosopumilales | Nitrosopumilaceae | Nitrosopumilaceae archaeon | |||
| 28530558 | 28530558 | PRJNA533114_P_NODE_36267_length_382_cov_5.588997_g36015_i0 | PRJNA533114 | 36267 | 382 | 5.588997 | 21.34996854 | Nitrosopumilaceae archaeon | 2202732 | Archaea | Archaea | 76.6 | 2.61e-13 | NR | MEX0764003.1 | 2202732 | g36015 | i0 | 45.2 | 0.816753926701571 | 104 | 51 | 80.9 | 2 | 17 | 325 | 633 | 731 | MEX0764003.1 LamG-like jellyroll fold domain-containing protein [Nitrosopumilaceae archaeon] | diamond | 312 | 76.6 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrosopumilales | Nitrosopumilaceae | Nitrosopumilaceae archaeon | |||
| 29256429 | 29256429 | PRJNA533114_P_NODE_74789_length_279_cov_1.577670_g74537_i0 | PRJNA533114 | 74789 | 279 | 1.57767 | 4.4016993 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 49.7 | 1.81e-4 | NR | HJS64354.1 | 2169593 | g74537 | i0 | 44.6 | 0.698924731182796 | 65 | 30 | 69.9 | 3 | 199 | 5 | 227 | 285 | HJS64354.1 hypothetical protein [Nitrososphaeraceae archaeon] | diamond | 195 | 49.7 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;