RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA533114" and tax_phylum = "Cossaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA533114 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4332100 4332100 PRJNA533114_P_NODE_45904_length_346_cov_1.128205_g45652_i0 PRJNA533114 45904 346 1.128205 3.9035893 Alphapapillomavirus 7 337042 Viruses Viruses 640 5.4999999999999996e-179   NTclustered gi|1258167396|gb|MF288663.1| 333761 g45652 i0 100 100 346 0 100 0 1 346 2488 2143 Human papillomavirus 18 isolate C415154_R1_1138896_N-P, complete genome blastn 34600 640 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 7
10709543 10709543 PRJNA533114_P_NODE_7589_length_810_cov_1.016282_g7390_i0 PRJNA533114 7589 810 1.016282 8.2318842 Parvoviridae sp. 1940570 Viruses Viruses 279 6.949999999999999e-89   NR XNT21000.1 1940570 g7390 i0 71 1.37777777777778 186 52 68.9 1 806 249 59 242 XNT21000.1 MAG: replication protein [Parvoviridae sp.] diamond 1116 279 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
15807880 15807880 PRJNA533114_P_NODE_50193_length_333_cov_0.780769_g49941_i0 PRJNA533114 50193 333 0.780769 2.59996077 Alphapapillomavirus 7 337042 Viruses Viruses 610 4.13e-170   NTclustered gi|2733486712|gb|PP781986.1| 333761 g49941 i0 99.7 99.978978978979 333 1 100 0 1 333 1159 1491 Human papillomavirus 18 isolate InDRE-41Tams/Mexico/2023, complete genome blastn 33293 610 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 7
29698275 29698275 PRJNA533114_P_NODE_65370_length_295_cov_1.612613_g65118_i0 PRJNA533114 65370 295 1.612613 4.75720835 Phoenicopteridae parvo-like hybrid virus 2794528 Viruses Viruses 63.2 4.12e-9   NR QTE03744.1 2794528 g65118 i0 62.8 0.43728813559322 43 16 43.7 0 239 111 345 387 QTE03744.1 MAG: replication protein [Phoenicopteridae parvo-like hybrid virus] diamond 129 63.2 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Phoenicopteridae parvo-like hybrid virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;