RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA533114", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA533114 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26602591 26602591 PRJNA533114_P_NODE_33981_length_394_cov_1.738318_g33729_i0 PRJNA533114 33981 394 1.738318 6.84897292 Synergistaceae bacterium 2053624 Bacteria Bacteria 58.9 4.36e-7   NR MBQ7221748.1 2053624 g33729 i0 36.3 0.944162436548223 124 66 93.7 4 392 24 558 669 MBQ7221748.1 putative Ig domain-containing protein [Synergistaceae bacterium] diamond 372 58.9 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28956098 28956098 PRJNA533114_P_NODE_10828_length_686_cov_1.582382_g10595_i0 PRJNA533114 10828 686 1.582382 10.85514052 Bacteria 2 Bacteria Bacteria 61.6 8.92e-8   NR MDR2137471.1 2053624 g10595 i0 43.8 1.66180758017493 80 33 31.5 3 221 6 23 98 MDR2137471.1 TerD family protein [Synergistaceae bacterium] diamond 1140 61.6 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;