RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA533114", tax_kingdom = "Thermotogati" and tax_phylum = "Deinococcota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Deinococcota · 11 ✖

tax_kingdom 1

  • Thermotogati · 11 ✖

bioproject 1

  • PRJNA533114 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
504587 504587 PRJNA533114_P_NODE_118981_length_241_cov_1.672619_g118729_i0 PRJNA533114 118981 241 1.672619 4.03101179 Deinococcus sonorensis 309891 Bacteria Bacteria 52.8 0.022   NTclustered gi|2745307249|gb|CP158299.1| 694439 g118729 i0 96.875 0.132780082987552 32 0 13 1 97 128 2506489 2506459 Deinococcus sonorensis KR-87 chromosome, complete genome blastn 32 52.8 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sonorensis
3056479 3056479 PRJNA533114_P_NODE_78483_length_273_cov_4.875000_g78231_i0 PRJNA533114 78483 273 4.875 13.30875 Deinococcus sonorensis 309891 Bacteria Bacteria 52.8 0.025   NTclustered gi|2745307249|gb|CP158299.1| 694439 g78231 i0 96.774 0.113553113553114 31 1 11 0 83 113 2384270 2384300 Deinococcus sonorensis KR-87 chromosome, complete genome blastn 31 52.8 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sonorensis
18969114 18969114 PRJNA533114_P_NODE_86475_length_261_cov_1.638298_g86223_i0 PRJNA533114 86475 261 1.638298 4.27595778 Deinococcus 1298 Bacteria Bacteria 477 3.3099999999999986e-130   NTclustered gi|2113031129|gb|OK500351.1| 47478 g86223 i0 99.617 104 261 1 100 0 1 261 491 751 Deinococcus sp. strain R11 16S ribosomal RNA gene, partial sequence blastn 27144 477 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp.
26697781 26697781 PRJNA533114_P_NODE_83901_length_265_cov_1.604167_g83649_i0 PRJNA533114 83901 265 1.604167 4.25104255 Deinococcus roseus 392414 Bacteria Bacteria 95.1 1.8e-20   NR WP_229684590.1 392414 g83649 i0 68.9 0.690566037735849 61 19 69.1 0 185 3 352 412 WP_229684590.1 glycosyl hydrolase family 18 protein [Deinococcus roseus] diamond 183 95.1 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus roseus
26934486 26934486 PRJNA533114_P_NODE_97442_length_250_cov_0.870056_g97190_i0 PRJNA533114 97442 250 0.870056 2.17514 Deinococcus 1298 Bacteria Bacteria 135 4.28e-35   NR WP_409737543.1 47478 g97190 i0 81.9 5.976 83 14 99.6 1 2 250 59 140 WP_409737543.1 hypothetical protein [Deinococcus sp.] diamond 1494 135 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp.
27488499 27488499 PRJNA533114_P_NODE_35903_length_384_cov_2.228296_g35651_i0 PRJNA533114 35903 384 2.228296 8.55665664 Deinococcus sp. Arct2-2 2568653 Bacteria Bacteria 48.5 0.00168   NR WP_136364215.1 2568653 g35651 i0 30 1.234375 100 58 75.8 3 71 361 700 790 WP_136364215.1 NPCBM/NEW2 domain-containing protein [Deinococcus sp. Arct2-2] diamond 474 48.5 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. Arct2-2
28056698 28056698 PRJNA533114_P_NODE_54885_length_320_cov_1.226721_g54633_i0 PRJNA533114 54885 320 1.226721 3.9255072 Trueperaceae bacterium 2026798 Bacteria Bacteria 48.1 0.00115   NR MDZ7704734.1 2026798 g54633 i0 46.2 0.4875 52 28 48.8 0 157 2 77 128 MDZ7704734.1 long-chain fatty acid--CoA ligase [Trueperaceae bacterium] diamond 156 48.1 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
28576957 28576957 PRJNA533114_P_NODE_41727_length_360_cov_1.442509_g41475_i0 PRJNA533114 41727 360 1.442509 5.1930324 Nitrospinota/Tectimicrobiota group 1802340 Bacteria Bacteria 81.6 2.96e-16   NR WP_092264064.1 856736 g41475 i0 45.7 7.28333333333333 92 46 76.7 1 3 278 4 91 WP_092264064.1 MIP/aquaporin family protein [Deinococcus reticulitermitis] diamond 2622 82.4 0.990291262135922 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus reticulitermitis
29509134 29509134 PRJNA533114_P_NODE_51470_length_329_cov_1.203125_g51218_i0 PRJNA533114 51470 329 1.203125 3.95828125 Deinococcus sp. QL22 2939437 Bacteria Bacteria 47 0.00333   NR WP_249396030.1 2939437 g51218 i0 31.6 0.893617021276596 98 57 88.4 3 30 320 696 784 WP_249396030.1 NPCBM/NEW2 domain-containing protein [Deinococcus sp. QL22] diamond 294 47 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. QL22
30267512 30267512 PRJNA533114_P_NODE_119732_length_241_cov_0.916667_g119480_i0 PRJNA533114 119732 241 0.916667 2.20916747 Deinococcus xinjiangensis 457454 Bacteria Bacteria 81.3 6.23e-16   NR WP_353542684.1 457454 g119480 i0 100 0.485477178423237 39 0 48.5 0 118 2 1 39 WP_353542684.1 catalase family protein [Deinococcus xinjiangensis] diamond 117 81.3 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus xinjiangensis
30440414 30440414 PRJNA533114_P_NODE_96213_length_250_cov_0.870056_g95961_i0 PRJNA533114 96213 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 83.2 1.13e-16   NR MDQ3397887.1 1913990 g95961 i0 69.2 3.732 52 16 62.4 0 2 157 284 335 MDQ3397887.1 aldo/keto reductase [Deinococcota bacterium] diamond 933 83.2 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;