RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA533114", tax_kingdom = "Orthornavirae" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA533114 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1780320 1780320 PRJNA533114_P_NODE_3322_length_1156_cov_2.506002_g3180_i0 PRJNA533114 3322 1156 2.506002 28.96938312 brine shrimp arlivirus 8 2900383 Viruses Viruses 406 8.539999999999999e-137   NR UNI74120.1 2900383 g3180 i0 56 0.908304498269896 350 154 90.8 0 1155 106 18 367 UNI74120.1 MAG: hypothetical protein [brine shrimp arlivirus 8] diamond 1050 406 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsaeighalis
6882201 6882201 PRJNA533114_P_NODE_122246_length_233_cov_2.031250_g121994_i0 PRJNA533114 122246 233 2.03125 4.7328125 Zebrafish influenza B-like virus RQ01 Viruses Viruses 54.7 0.006   NTclustered gi|425786094|gb|CY128441.1| RQ01 g121994 i0 100 0.124463519313305 29 0 12 0 53 81 2268 2296 Influenza A virus (A/Viet Nam/001-1424/2009(H1N1)) PB1 and PB1-F2 genes, complete sequence blastn 29 54.7 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Zebrafish influenza B-like virus
32449074 32449074 PRJNA533114_P_NODE_18159_length_531_cov_1.510917_g17910_i0 PRJNA533114 18159 531 1.510917 8.02296927 African cichlid piscichuvirus 3065075 Viruses Viruses 97.1 1.05e-19   NR WLN26256.1 3065075 g17910 i0 50.5 0.514124293785311 91 45 51.4 0 530 258 144 234 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 273 97.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;