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contig_metadata

30 rows where bioproject = "PRJNA533114", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 30 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 30 ✖

bioproject 1

  • PRJNA533114 · 30 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6883281 6883281 PRJNA533114_P_NODE_8846_length_756_cov_2.131772_g8630_i0 PRJNA533114 8846 756 2.1317719999999998 16.11619632 root 1 Root_unresolved Root_unresolved 276 2.09e-85   NR WP_013182645.1 71667 g8630 i0 58 6.07539682539683 219 86 86.9 3 751 95 391 603 WP_013182645.1 phosphoenolpyruvate carboxykinase (GTP) [Waddlia chondrophila] diamond 4593 278 0.992805755395683 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae Waddlia Waddlia chondrophila
11983913 11983913 PRJNA533114_P_NODE_4530_length_1020_cov_23.864836_g4372_i0 PRJNA533114 4530 1020 23.864836 243.4213272 Simkania sp. 34094 Bacteria Bacteria 283 1.99e-91   NR MCB1084310.1 34094 g4372 i0 69.9 0.576470588235294 196 59 57.6 0 745 158 1 196 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 588 283 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
13871436 13871436 PRJNA533114_P_NODE_5251_length_956_cov_4.407701_g5082_i0 PRJNA533114 5251 956 4.407701 42.13762156 Simkania sp. 34094 Bacteria Bacteria 283 6.709999999999999e-92   NR MCB1084310.1 34094 g5082 i0 73.3 0.599372384937239 191 51 59.9 0 726 154 1 191 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 573 283 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
26712637 26712637 PRJNA533114_P_NODE_71881_length_284_cov_1.303318_g71629_i0 PRJNA533114 71881 284 1.303318 3.70142312 PVC group 1783257 Bacteria Bacteria 102 1.26e-23   NR WP_013182214.1 71667 g71629 i0 58.2 7.98591549295775 79 33 83.5 0 22 258 241 319 WP_013182214.1 PLP-dependent cysteine synthase family protein [Waddlia chondrophila] diamond 2268 103 0.990291262135922 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae Waddlia Waddlia chondrophila
27077671 27077671 PRJNA533114_P_NODE_33722_length_395_cov_3.975155_g33470_i0 PRJNA533114 33722 395 3.975155 15.70186225 Chlamydiales bacterium 2047757 Bacteria Bacteria 222 4.37e-72   NR MCP5470421.1 2047757 g33470 i0 82.3 0.987341772151899 130 23 98.7 0 390 1 1 130 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 390 222 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27109177 27109177 PRJNA533114_P_NODE_98642_length_249_cov_0.875000_g98390_i0 PRJNA533114 98642 249 0.875 2.17875 Simkania sp. 34094 Bacteria Bacteria 47 8.69e-4   NR MCB1084431.1 34094 g98390 i0 39.7 0.819277108433735 68 39 81.9 1 208 5 40 105 MCB1084431.1 hypothetical protein [Simkania sp.] diamond 204 47 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
27835613 27835613 PRJNA533114_P_NODE_21484_length_488_cov_13.660241_g21234_i0 PRJNA533114 21484 488 13.660241 66.66197608 Chlamydiales bacterium 2047757 Bacteria Bacteria 197 1.62e-61   NR MCP5470420.1 2047757 g21234 i0 78.4 0.76844262295082 125 27 76.8 0 487 113 1 125 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 375 197 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27835667 27835667 PRJNA533114_P_NODE_56184_length_317_cov_0.946721_g55932_i0 PRJNA533114 56184 317 0.946721 3.00110557 Parachlamydia sp. 2052048 Bacteria Bacteria 51.6 5.94e-5   NR MCE2983999.1 2052048 g55932 i0 35.2 1.75078864353312 88 48 83.3 2 267 4 66 144 MCE2983999.1 DUF4804 domain-containing protein [Parachlamydia sp.] diamond 555 51.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia sp.
28151694 28151694 PRJNA533114_P_NODE_26465_length_443_cov_1.159459_g26213_i0 PRJNA533114 26465 443 1.159459 5.13640337 Simkania sp. 34094 Bacteria Bacteria 138 1.19e-38   NR MCB1084323.1 34094 g26213 i0 65.6 0.609480812641084 90 31 60.9 0 441 172 69 158 MCB1084323.1 AMP-binding protein [Simkania sp.] diamond 270 138 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
28182795 28182795 PRJNA533114_P_NODE_21046_length_494_cov_1.403800_g20797_i0 PRJNA533114 21046 494 1.4038 6.934772 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 70.9 7.06e-13   NR HNA63020.1 2047756 g20797 i0 54.4 0.346153846153846 57 26 34.6 0 173 3 5 61 HNA63020.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 171 70.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
28719947 28719947 PRJNA533114_P_NODE_43827_length_353_cov_0.739286_g43575_i0 PRJNA533114 43827 353 0.739286 2.60967958 Chlamydiia bacterium 2052156 Bacteria Bacteria 57 9.91e-7   NR MCH9617814.1 2052156 g43575 i0 35.1 2.21813031161473 97 60 82.4 2 294 4 19 112 MCH9617814.1 hypothetical protein [Chlamydiia bacterium] diamond 783 57 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
28908904 28908904 PRJNA533114_P_NODE_103828_length_247_cov_0.885057_g103576_i0 PRJNA533114 103828 247 0.885057 2.18609079 Candidatus Anoxychlamydiales bacterium 2705072 Bacteria Bacteria 50.4 5.26e-5   NR NGX30561.1 2705072 g103576 i0 46.6 0.704453441295547 58 25 69.2 2 61 231 126 178 NGX30561.1 Ribosomal large subunit pseudouridine synthase A [Candidatus Anoxychlamydiales bacterium] diamond 174 50.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Candidatus Anoxychlamydiales     Candidatus Anoxychlamydiales bacterium
29035755 29035755 PRJNA533114_P_NODE_22928_length_473_cov_4.325000_g22678_i0 PRJNA533114 22928 473 4.325 20.45725 Chlamydiales bacterium 2047757 Bacteria Bacteria 197 1.33e-61   NR MCP5470420.1 2047757 g22678 i0 78.4 0.792811839323467 125 27 79.3 0 472 98 1 125 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 375 197 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29067282 29067282 PRJNA533114_P_NODE_40608_length_364_cov_1.632302_g40356_i0 PRJNA533114 40608 364 1.632302 5.94157928 Chlamydiales bacterium 2047757 Bacteria Bacteria 93.2 2.35e-19   NR MFT4554272.1 2047757 g40356 i0 43.5 0.89010989010989 108 61 89 0 324 1 197 304 MFT4554272.1 hypothetical protein [Chlamydiales bacterium] diamond 324 93.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29225371 29225371 PRJNA533114_P_NODE_87429_length_260_cov_1.235294_g87177_i0 PRJNA533114 87429 260 1.235294 3.2117644 Chlamydiales bacterium 2047757 Bacteria Bacteria 67 5.01e-11   NR MCP5470430.1 2047757 g87177 i0 59.3 2.79230769230769 81 33 93.5 0 248 6 43 123 MCP5470430.1 hypothetical protein [Chlamydiales bacterium] diamond 726 67 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29351361 29351361 PRJNA533114_P_NODE_105389_length_247_cov_0.885057_g105137_i0 PRJNA533114 105389 247 0.885057 2.18609079 Chlamydiota bacterium 2081524 Bacteria Bacteria 59.7 4.18e-8   NR MFC2049554.1 2081524 g105137 i0 38.6 0.850202429149798 70 42 85 1 243 34 620 688 MFC2049554.1 hypothetical protein [Chlamydiota bacterium] diamond 210 59.7 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
29351400 29351400 PRJNA533114_P_NODE_21309_length_490_cov_34.225420_g21059_i0 PRJNA533114 21309 490 34.22542 167.704558 Chlamydiales bacterium 2047757 Bacteria Bacteria 137 7.81e-38   NR MCP5470420.1 2047757 g21059 i0 80.8 0.477551020408163 78 15 47.8 0 488 255 2 79 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 234 137 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29919803 29919803 PRJNA533114_P_NODE_16571_length_555_cov_3.475104_g16322_i0 PRJNA533114 16571 555 3.475104 19.2868272 Simkania sp. 34094 Bacteria Bacteria 53.9 3.53e-6   NR MCB1084365.1 34094 g16322 i0 45.5 0.297297297297297 55 30 29.7 0 69 233 21 75 MCB1084365.1 hypothetical protein [Simkania sp.] diamond 165 53.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
29951294 29951294 PRJNA533114_P_NODE_28631_length_426_cov_2.807365_g28379_i0 PRJNA533114 28631 426 2.807365 11.9593749 Chlamydiota bacterium 2081524 Bacteria Bacteria 63.9 7.51e-9   NR NGX26448.1 2081524 g28379 i0 45.3 0.901408450704225 64 33 45.1 1 301 110 193 254 NGX26448.1 hypothetical protein [Chlamydiota bacterium] diamond 384 63.9 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
30109247 30109247 PRJNA533114_P_NODE_64092_length_298_cov_1.364444_g63840_i0 PRJNA533114 64092 298 1.364444 4.06604312 Simkania sp. 34094 Bacteria Bacteria 171 3.41e-52   NR MCB1084350.1 34094 g63840 i0 81.7 1.88255033557047 93 17 93.6 0 6 284 4 96 MCB1084350.1 MC/SLC25 family protein [Simkania sp.] diamond 561 171 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
30172360 30172360 PRJNA533114_P_NODE_31392_length_408_cov_2.295522_g31140_i0 PRJNA533114 31392 408 2.295522 9.36572976 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 63.2 1.73e-8   NR MBA3238892.1 2052176 g31140 i0 31.7 0.602941176470588 82 56 60.3 0 281 36 1219 1300 MBA3238892.1 ankyrin repeat domain-containing protein [Parachlamydiaceae bacterium] diamond 246 63.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
30362440 30362440 PRJNA533114_P_NODE_26232_length_444_cov_2.293801_g25980_i0 PRJNA533114 26232 444 2.293801 10.18447644 Parachlamydia acanthamoebae 83552 Bacteria Bacteria 54.7 2.08e-5   NR WP_006341607.1 83552 g25980 i0 45.3 1.02702702702703 53 29 35.8 0 162 4 2 54 WP_006341607.1 phosphoenolpyruvate carboxykinase (GTP) [Parachlamydia acanthamoebae] diamond 456 54.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia acanthamoebae
30899232 30899232 PRJNA533114_P_NODE_121774_length_237_cov_2.432927_g121522_i0 PRJNA533114 121774 237 2.432927 5.76603699 Chlamydiales bacterium 2047757 Bacteria Bacteria 48.1 3.98e-4   NR MCE5293698.1 2047757 g121522 i0 52.8 0.987341772151899 36 17 45.6 0 119 12 138 173 MCE5293698.1 hypothetical protein [Chlamydiales bacterium] diamond 234 48.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31689450 31689450 PRJNA533114_P_NODE_20937_length_495_cov_1.613744_g20688_i0 PRJNA533114 20937 495 1.613744 7.9880328 Chlamydiales bacterium 2047757 Bacteria Bacteria 194 1.43e-60   NR MCP5470420.1 2047757 g20688 i0 78.8 0.8 132 26 80 1 482 87 1 130 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 396 194 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31910993 31910993 PRJNA533114_P_NODE_45637_length_347_cov_0.989051_g45385_i0 PRJNA533114 45637 347 0.989051 3.43200697 Simkania sp. 34094 Bacteria Bacteria 83.2 1.76e-18   NR MCB1084368.1 34094 g45385 i0 70.9 0.475504322766571 55 16 47.6 0 283 119 1 55 MCB1084368.1 hypothetical protein [Simkania sp.] diamond 165 83.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
31942440 31942440 PRJNA533114_P_NODE_56917_length_315_cov_1.272727_g56665_i0 PRJNA533114 56917 315 1.272727 4.00909005 Chlamydiales bacterium 2047757 Bacteria Bacteria 137 1.24e-38   NR MEZ5315132.1 2047757 g56665 i0 64.4 1.98095238095238 104 35 99 1 3 314 31 132 MEZ5315132.1 orotate phosphoribosyltransferase [Chlamydiales bacterium] diamond 624 137 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
32132589 32132589 PRJNA533114_P_NODE_33718_length_395_cov_5.164596_g33466_i0 PRJNA533114 33718 395 5.164596 20.4001542 Chlamydiales bacterium 2047757 Bacteria Bacteria 139 3.06e-39   NR MCP5470420.1 2047757 g33466 i0 82.3 0.6 79 14 60 0 393 157 1 79 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 237 139 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
32559091 32559091 PRJNA533114_P_NODE_87639_length_259_cov_2.069892_g87387_i0 PRJNA533114 87639 259 2.069892 5.36102028 root 1 Root_unresolved Root_unresolved 83.2 6.52e-18   NR MCB1084326.1 34094 g87387 i0 47.6 5.88416988416988 84 41 93.8 1 243 1 61 144 MCB1084326.1 serine/threonine-protein kinase [Simkania sp.] diamond 1524 84 0.990476190476191 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
32606909 32606909 PRJNA533114_P_NODE_80580_length_270_cov_1.796954_g80328_i0 PRJNA533114 80580 270 1.796954 4.8517758 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 136 3.69e-35   NR MBA3816387.1 2052176 g80328 i0 68.5 6.9 89 28 98.9 0 269 3 336 424 MBA3816387.1 phosphoenolpyruvate carboxykinase (GTP) [Parachlamydiaceae bacterium] diamond 1863 136 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
32890187 32890187 PRJNA533114_P_NODE_9760_length_721_cov_3.628086_g9533_i0 PRJNA533114 9760 721 3.628086 26.15850006 Simkania sp. 34094 Bacteria Bacteria 158 5.8e-46   NR MCB1084315.1 34094 g9533 i0 88.2 1.09015256588072 85 10 35.4 0 29 283 1 85 MCB1084315.1 hypothetical protein [Simkania sp.] diamond 786 158 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;