RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA533114", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA533114 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29572158 29572158 PRJNA533114_P_NODE_111310_length_244_cov_1.456140_g111058_i0 PRJNA533114 111310 244 1.45614 3.5529816 Nitrospinaceae bacterium 2358456 Bacteria Bacteria 65.5 2.74e-10   NR MFQ5450167.1 2358456 g111058 i0 46.6 1.74590163934426 73 39 89.8 0 5 223 201 273 MFQ5450167.1 DUF547 domain-containing protein [Nitrospinaceae bacterium] diamond 426 65.5 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae   Nitrospinaceae bacterium
30819406 30819406 PRJNA533114_P_NODE_112014_length_244_cov_0.900585_g111762_i0 PRJNA533114 112014 244 0.900585 2.1974274 Nitrospinota/Tectimicrobiota group 1802340 Bacteria Bacteria 52.8 5.05e-6   NR MBT4375632.1 2024844 g111762 i0 61.5 3.03688524590164 39 15 48 0 230 114 151 189 MBT4375632.1 elongation factor P [Nitrospina sp.] diamond 741 52.8 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae Nitrospina Nitrospina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;