RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA533114", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 12 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 12 ✖

bioproject 1

  • PRJNA533114 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15145632 15145632 PRJNA533114_P_NODE_44672_length_350_cov_1.111913_g44420_i0 PRJNA533114 44672 350 1.111913 3.8916955 Methanococcus 2184 Archaea Archaea 52.8 0.033   NTclustered gi|1342459100|gb|CP026606.1| 39152 g44420 i0 100 0.548571428571429 28 0 8 0 260 287 1225424 1225397 Methanococcus maripaludis strain DSM 2067 chromosome, complete genome blastn 192 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
19631390 19631390 PRJNA533114_P_NODE_6196_length_889_cov_3.919118_g6014_i0 PRJNA533114 6196 889 3.919118 34.84095902 Methanocaldococcus fervens 83171 Archaea Archaea 54.7 0.025   NTclustered gi|256793173|gb|CP001696.1| 573064 g6014 i0 100 0.0326209223847019 29 0 3 0 479 507 1282644 1282616 Methanocaldococcus fervens AG86, complete genome blastn 29 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus fervens
26617872 26617872 PRJNA533114_P_NODE_67741_length_290_cov_1.741935_g67489_i0 PRJNA533114 67741 290 1.741935 5.0516115 root 1 Root_unresolved Root_unresolved 71.2 5.72e-12   NR WP_052399995.1 2162 g67489 i0 32 3.6 97 65 99.3 1 2 289 43 139 WP_052399995.1 MEDS domain-containing protein [Methanobacterium formicicum] diamond 1044 71.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium formicicum
27488586 27488586 PRJNA533114_P_NODE_94103_length_251_cov_0.865169_g93851_i0 PRJNA533114 94103 251 0.865169 2.17157419 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 47 0.00135   NR WP_295601868.1 253161 g93851 i0 49.2 2.36653386454183 59 29 69.3 1 242 69 312 370 WP_295601868.1 hypothetical protein [uncultured Methanobrevibacter sp.] diamond 594 47 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
27741446 27741446 PRJNA533114_P_NODE_87924_length_259_cov_1.344086_g87672_i0 PRJNA533114 87924 259 1.344086 3.48118274 Methanobrevibacter sp. UBA188 1915473 Archaea Archaea 89.4 1.85e-18   NR WP_292883709.1 1915473 g87672 i0 48.8 0.94980694980695 82 42 95 0 258 13 741 822 WP_292883709.1 ThiF family adenylyltransferase, partial [Methanobrevibacter sp. UBA188] diamond 246 89.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. UBA188
28261080 28261080 PRJNA533114_P_NODE_17166_length_546_cov_1.930233_g16917_i0 PRJNA533114 17166 546 1.930233 10.53907218 root 1 Root_unresolved Root_unresolved 55.1 3.73e-5   NR WP_071906737.1 118062 g16917 i0 35.8 1.71978021978022 134 74 71.4 6 534 145 1 126 WP_071906737.1 beta strand repeat-containing protein [Methanobacterium congolense] diamond 939 55.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium congolense
29098834 29098834 PRJNA533114_P_NODE_67708_length_290_cov_1.829493_g67456_i0 PRJNA533114 67708 290 1.829493 5.3055297 Methanotorris igneus 2189 Archaea Archaea 95.5 1.17e-20   NR WP_013798697.1 2189 g67456 i0 61.2 3.11379310344828 85 26 87.9 1 290 36 42 119 WP_013798697.1 NCS2 family permease [Methanotorris igneus] diamond 903 95.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanotorris Methanotorris igneus
29414441 29414441 PRJNA533114_P_NODE_84809_length_264_cov_1.209424_g84557_i0 PRJNA533114 84809 264 1.209424 3.19287936 Methanobacterium sp. 2164 Archaea Archaea 72.4 1.67e-12   NR TMS43299.1 2164 g84557 i0 57.1 3.34090909090909 56 24 63.6 0 170 3 55 110 TMS43299.1 MAG: hydroxylamine reductase [Methanobacterium sp.] diamond 882 72.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
30520006 30520006 PRJNA533114_P_NODE_47633_length_340_cov_1.951311_g47381_i0 PRJNA533114 47633 340 1.951311 6.6344574 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 54.7 1.32e-6   NR WP_299522786.1 253161 g47381 i0 34 1.92352941176471 106 69 92.6 1 22 336 4 109 WP_299522786.1 universal stress protein [uncultured Methanobrevibacter sp.] diamond 654 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
31704570 31704570 PRJNA533114_P_NODE_40317_length_365_cov_2.284247_g40065_i0 PRJNA533114 40317 365 2.284247 8.33750155 Methanosphaera 2316 Archaea Archaea 56.2 2.45e-6   NR WP_308573811.1 262501 g40065 i0 39.2 4.77534246575342 79 44 62.5 2 321 94 99 176 WP_308573811.1 hypothetical protein [uncultured Methanosphaera sp.] diamond 1743 56.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera uncultured Methanosphaera sp.
31879109 31879109 PRJNA533114_P_NODE_120997_length_241_cov_0.916667_g120745_i0 PRJNA533114 120997 241 0.916667 2.20916747 Methanosphaera sp. 2666342 Archaea Archaea 50.4 7.24e-5   NR MEE3325117.1 2666342 g120745 i0 34.5 2.04149377593361 84 49 97.1 1 5 238 2038 2121 MEE3325117.1 hypothetical protein [Methanosphaera sp.] diamond 492 50.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
32495712 32495712 PRJNA533114_P_NODE_80259_length_271_cov_1.222222_g80007_i0 PRJNA533114 80259 271 1.222222 3.31222162 root 1 Root_unresolved Root_unresolved 44.7 0.0112   NR WP_321423206.1 176306 g80007 i0 37.5 6.14391143911439 88 52 95.2 2 269 12 714 800 WP_321423206.1 PKD domain-containing protein [uncultured Methanobacterium sp.] diamond 1665 44.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium uncultured Methanobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;