RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA533114", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA533114 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26697754 26697754 PRJNA533114_P_NODE_64961_length_296_cov_1.381166_g64709_i0 PRJNA533114 64961 296 1.381166 4.08825136 Rhodothermaceae bacterium 2026787 Bacteria Bacteria 43.1 0.0395   NR MFA8341357.1 2026787 g64709 i0 28.8 0.739864864864865 73 51 74 1 281 63 147 218 MFA8341357.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB [Rhodothermaceae bacterium] diamond 219 43.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium
30804353 30804353 PRJNA533114_P_NODE_42734_length_356_cov_1.932862_g42482_i0 PRJNA533114 42734 356 1.932862 6.88098872 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 76.6 7.59e-14   NR HLT46187.1 2838334 g42482 i0 42.5 2.73876404494382 106 42 89.3 3 6 323 160 246 HLT46187.1 carboxylating nicotinate-nucleotide diphosphorylase [Rubricoccaceae bacterium] diamond 975 76.6 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;