RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA533114", tax_clade = "FCB group" and tax_phylum = "Candidatus Zixiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA533114 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26888097 26888097 PRJNA533114_P_NODE_68581_length_289_cov_1.337963_g68329_i0 PRJNA533114 68581 289 1.337963 3.86671307 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 68.2 7.09e-11   NR MFQ5452986.1 2053527 g68329 i0 39.5 2.70934256055363 86 52 89.3 0 284 27 144 229 MFQ5452986.1 CHRD domain-containing protein [Candidatus Zixiibacteriota bacterium] diamond 783 68.2 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
28467411 28467411 PRJNA533114_P_NODE_47846_length_340_cov_1.044944_g47594_i0 PRJNA533114 47846 340 1.044944 3.5528096 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 52 4.22e-5   NR MBD3170297.1 2053527 g47594 i0 29 0.944117647058824 107 71 90 2 26 331 114 220 MBD3170297.1 hypothetical protein [Candidatus Zixiibacteriota bacterium] diamond 321 52 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
32732898 32732898 PRJNA533114_P_NODE_100940_length_248_cov_1.325714_g100688_i0 PRJNA533114 100940 248 1.325714 3.28777072 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 50.1 1.01e-4   NR MBD3234869.1 2053527 g100688 i0 50.8 1.62096774193548 65 28 73.8 2 65 247 24 88 MBD3234869.1 hypothetical protein [Candidatus Zixiibacteriota bacterium] diamond 402 50.1 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;