RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA533114", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA533114 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27046094 27046094 PRJNA533114_P_NODE_40482_length_365_cov_1.051370_g40230_i0 PRJNA533114 40482 365 1.05137 3.8375005 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 105 5.13e-24   NR PCJ59432.1 2030809 g40230 i0 48.7 0.928767123287671 113 55 92.9 1 364 26 285 394 PCJ59432.1 MAG: MBL fold metallo-hydrolase [Candidatus Hydrogenedentota bacterium] diamond 339 105 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27614958 27614958 PRJNA533114_P_NODE_70824_length_286_cov_0.887324_g70572_i0 PRJNA533114 70824 286 0.887324 2.53774664 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 57 8.65e-8   NR MEK7793415.1 2030809 g70572 i0 41 0.870629370629371 83 43 87.1 3 252 4 10 86 MEK7793415.1 PhoPQ-activated protein PqaA family protein [Candidatus Hydrogenedentota bacterium] diamond 249 57 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29288019 29288019 PRJNA533114_P_NODE_18949_length_520_cov_1.257271_g18700_i0 PRJNA533114 18949 520 1.257271 6.5378092 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 150 8.61e-40   NR MBM3289030.1 2030809 g18700 i0 66.7 0.588461538461538 102 34 58.8 0 205 510 4 105 MBM3289030.1 NAD(P)/FAD-dependent oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 306 150 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29635156 29635156 PRJNA533114_P_NODE_68290_length_289_cov_2.273148_g68038_i0 PRJNA533114 68290 289 2.273148 6.56939772 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 97.8 2.91e-21   NR MCH7959314.1 2030809 g68038 i0 52.3 0.892733564013841 86 39 87.2 1 253 2 624 709 MCH7959314.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 258 97.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;