RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA533114", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA533114 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28751457 28751457 PRJNA533114_P_NODE_81647_length_269_cov_1.040816_g81395_i0 PRJNA533114 81647 269 1.040816 2.79979504 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 43.1 0.0363   NR MCD4828980.1 2030808 g81395 i0 41.2 0.568773234200744 51 27 56.9 1 100 252 209 256 MCD4828980.1 sigma-54 dependent transcriptional regulator [Candidatus Cloacimonadota bacterium] diamond 153 43.1 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30741090 30741090 PRJNA533114_P_NODE_13194_length_623_cov_1.450909_g12950_i0 PRJNA533114 13194 623 1.450909 9.03916307 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 50.4 0.0023   NR PCJ21575.1 2030808 g12950 i0 33.3 0.57784911717496 120 66 54.9 5 564 223 195 306 PCJ21575.1 MAG: hypothetical protein COB02_02975 [Candidatus Cloacimonadota bacterium] diamond 360 50.4 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30772946 30772946 PRJNA533114_P_NODE_65634_length_295_cov_1.040541_g65382_i0 PRJNA533114 65634 295 1.040541 3.06959595 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 57 6.54e-7   NR MFO7895620.1 3060593 g65382 i0 38 1.01694915254237 100 49 97.6 5 293 6 200 290 MFO7895620.1 FlgD immunoglobulin-like domain containing protein [Candidatus Cloacimonadales bacterium] diamond 300 57 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;