RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA533114", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woeseibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA533114 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28277670 28277670 PRJNA533114_P_NODE_6186_length_890_cov_2.033048_g6004_i0 PRJNA533114 6186 890 2.033048 18.0941272 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 172 2.59e-48   NR HRN71286.1 2026804 g6004 i0 38.3 0.862921348314607 256 143 81.2 3 818 96 1 256 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 768 172 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
31278302 31278302 PRJNA533114_P_NODE_67935_length_290_cov_1.373272_g67683_i0 PRJNA533114 67935 290 1.373272 3.9824888 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 43.5 0.0302   NR HRN71286.1 2026804 g67683 i0 37.3 0.775862068965517 75 45 76.6 2 9 230 57 130 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 225 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
31499917 31499917 PRJNA533114_P_NODE_27796_length_432_cov_3.718663_g27544_i0 PRJNA533114 27796 432 3.718663 16.06462416 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 118 1.51e-29   NR HPT66021.1 2026804 g27544 i0 41 2 144 85 100 0 1 432 47 190 HPT66021.1 SIMPL domain-containing protein [Candidatus Woesebacteria bacterium] diamond 864 118 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
32480672 32480672 PRJNA533114_P_NODE_28859_length_425_cov_1.312500_g28607_i0 PRJNA533114 28859 425 1.3125 5.578125 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 80.1 5.12e-15   NR HRN71286.1 2026804 g28607 i0 40.5 0.854117647058824 121 62 81.2 3 346 2 1 117 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 363 80.1 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;