RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA533114", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA533114 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27804406 27804406 PRJNA533114_P_NODE_76204_length_277_cov_1.470588_g75952_i0 PRJNA533114 76204 277 1.470588 4.07352876 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 89.7 4.12e-19   NR MCH8292437.1 2026781 g75952 i0 54.7 2.44765342960289 75 34 81.2 0 7 231 215 289 MCH8292437.1 UTP--glucose-1-phosphate uridylyltransferase [Candidatus Poribacteria bacterium] diamond 678 89.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
28625285 28625285 PRJNA533114_P_NODE_27527_length_435_cov_0.834254_g27275_i0 PRJNA533114 27527 435 0.834254 3.6290049 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 42.7 0.0489   NR RKU22847.1 2026781 g27275 i0 41.7 0.331034482758621 48 28 33.1 0 178 321 36 83 RKU22847.1 MAG: hypothetical protein C6503_03530 [Candidatus Poribacteria bacterium] diamond 144 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29982852 29982852 PRJNA533114_P_NODE_114511_length_243_cov_0.905882_g114259_i0 PRJNA533114 114511 243 0.905882 2.20129326 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 48.9 2.45e-4   NR MCG9134306.1 2026781 g114259 i0 41.4 0.716049382716049 58 33 70.4 1 56 226 557 614 MCG9134306.1 sigma-70 family RNA polymerase sigma factor [Candidatus Poribacteria bacterium] diamond 174 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30772920 30772920 PRJNA533114_P_NODE_48894_length_336_cov_2.581749_g48642_i0 PRJNA533114 48894 336 2.581749 8.67467664 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 48.5 9.18e-4   NR RKU23905.1 2026781 g48642 i0 33.7 1.54464285714286 86 48 75.9 2 5 259 79 156 RKU23905.1 MAG: hypothetical protein C6500_00620 [Candidatus Poribacteria bacterium] diamond 519 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;