RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA533114", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA533114 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11983975 11983975 PRJNA533114_P_NODE_50690_length_331_cov_1.565891_g50438_i0 PRJNA533114 50690 331 1.565891 5.18309921 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 54.7 0.009   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g50438 i0 92.105 0.114803625377644 38 3 11 0 21 58 1340314 1340277 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 38 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
28530510 28530510 PRJNA533114_P_NODE_120107_length_241_cov_0.916667_g119855_i0 PRJNA533114 120107 241 0.916667 2.20916747 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 150 4.19e-43   NR MBX9809767.1 2044595 g119855 i0 97.4 0.95850622406639 77 2 95.9 0 241 11 102 178 MBX9809767.1 AAA family ATPase [Candidatus Altimarinota bacterium] diamond 231 150 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29145643 29145643 PRJNA533114_P_NODE_11229_length_674_cov_1.186356_g10993_i0 PRJNA533114 11229 674 1.186356 7.99603944 Bacteria 2 Bacteria Bacteria 69.3 1.35e-9   NR HIQ56571.1 2044595 g10993 i0 37.1 1.76261127596439 132 75 56.5 4 536 156 724 852 HIQ56571.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 1188 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32512508 32512508 PRJNA533114_P_NODE_43379_length_354_cov_1.466192_g43127_i0 PRJNA533114 43379 354 1.466192 5.19031968 Candidatus Gracilibacteria bacterium CG17_big_fil_post_rev_8_21_14_2_5 2044595 Bacteria Bacteria 88.2 1.29e-17   NR PIV90670.1 1974580 g43127 i0 62.5 1.69491525423729 64 24 54.2 0 1 192 387 450 PIV90670.1 MAG: deoxyribodipyrimidine photolyase [Candidatus Gracilibacteria bacterium CG17_big_fil_post_rev_8_21_14_2_50_48_13] diamond 600 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium CG17_big_fil_post_rev_8_21_14_2_50_48_13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;