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contig_metadata

31 rows where bioproject = "PRJNA532380" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 31 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA532380 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
503574 503574 PRJNA532380_P_NODE_13881_length_243_cov_1.381443_g13556_i0 PRJNA532380 13881 243 1.381443 3.35690649 Ziziphus jujuba 326968 Plants Plants 52.8 0.022   NTclustered gi|2739574736|gb|CP157410.1| 326968 g13556 i0 96.774 0.242798353909465 31 1 13 0 105 135 1677425 1677395 Ziziphus jujuba isolate TW-2024b chromosome 08 blastn 59 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rhamnaceae Ziziphus Ziziphus jujuba
504277 504277 PRJNA532380_P_NODE_6061_length_397_cov_1.778736_g5736_i0 PRJNA532380 6061 397 1.778736 7.06158192 Eutrema salsugineum 72664 Plants Plants 56.5 0.003   NTclustered gi|1350336020|ref|XM_024150939.1| 72664 g5736 i0 96.97 0.16624685138539 33 1 8 0 229 261 410 378 PREDICTED: Eutrema salsugineum eukaryotic translation initiation factor 5A-3 (LOC18008211), transcript variant X2, mRNA blastn 66 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Eutrema Eutrema salsugineum
504313 504313 PRJNA532380_P_NODE_7301_length_354_cov_1.534426_g6976_i0 PRJNA532380 7301 354 1.534426 5.43186804 Eukaryota 2759 Plants Plants 191 1.16e-56   NR DAD18900.1 4432 g6976 i0 73.5 181.389830508475 113 30 95.8 0 15 353 1 113 DAD18900.1 TPA_asm: hypothetical protein HUJ06_020363 [Nelumbo nucifera] diamond 64212 192 0.994791666666667 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Nelumbonaceae Nelumbo Nelumbo nucifera
1117339 1117339 PRJNA532380_P_NODE_21461_length_194_cov_0.841379_g21136_i0 PRJNA532380 21461 194 0.841379 1.63227526 Magnoliopsida 3398 Plants Plants 294 2.52e-75   NTclustered gi|2424881909|ref|NC_069316.1| 29654 g21136 i0 96.61 179.737113402062 177 6 91 0 1 177 107146 106970 Zannichellia palustris chloroplast, complete genome blastn 34869 294 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Alismatales Potamogetonaceae Zannichellia Zannichellia palustris
3055293 3055293 PRJNA532380_P_NODE_8163_length_332_cov_2.014134_g7838_i0 PRJNA532380 8163 332 2.014134 6.68692488 Medicago truncatula 3880 Plants Plants 215 3.7700000000000003e-51   NTclustered gi|217075589|gb|BT053496.1| 3880 g7838 i0 81.679 42.1746987951807 262 44 78 4 33 292 450 191 Medicago truncatula clone MTYFP_FQ_FR_FS1G-I-6 unknown mRNA blastn 14002 215 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Medicago Medicago truncatula
4330770 4330770 PRJNA532380_P_NODE_22724_length_188_cov_1.496403_g22399_i0 PRJNA532380 22724 188 1.496403 2.81323764 Glycine max 3847 Plants Plants 52.8 0.016   NTclustered gi|332144645|dbj|AP011812.1| 3847 g22399 i0 96.875 0.340425531914894 32 0 16 1 5 35 27959 27990 Glycine max DNA, BAC clone: MiB309A12, complete sequence blastn 64 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
5608040 5608040 PRJNA532380_P_NODE_6565_length_378_cov_3.358663_g6240_i0 PRJNA532380 6565 378 3.358663 12.69574614 Eukaryota 2759 Plants Plants 212 2.08e-65   NR XP_022154562.1 3673 g6240 i0 92 1207.8253968254 125 10 99.2 0 3 377 3 127 XP_022154562.1 uncharacterized protein LOC111021800 [Momordica charantia] diamond 456558 214 0.990654205607477 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Momordica Momordica charantia
6221013 6221013 PRJNA532380_P_NODE_17305_length_216_cov_1.658683_g16980_i0 PRJNA532380 17305 216 1.658683 3.58275528 Fagaceae 3503 Plants Plants 394 2.75e-105   NTclustered gi|1878849207|gb|MT796543.1| 3512 g16980 i0 99.537 100 216 1 100 0 1 216 4914 5129 Quercus rubra isolate DM598 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21600 394 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
11982309 11982309 PRJNA532380_P_NODE_15190_length_232_cov_0.852459_g14865_i0 PRJNA532380 15190 232 0.852459 1.97770488 Phoenix dactylifera 42345 Plants Plants 52.8 0.021   NTclustered gi|1964481411|ref|XM_008780162.4| 42345 g14865 i0 100 0.120689655172414 28 0 12 0 62 89 579 552 PREDICTED: Phoenix dactylifera ubiquitin-conjugating enzyme E2 36-like (LOC103697914), transcript variant X1, mRNA blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Arecales Arecaceae Phoenix Phoenix dactylifera
11983083 11983083 PRJNA532380_P_NODE_9690_length_300_cov_1.649402_g9365_i0 PRJNA532380 9690 300 1.649402 4.948206 Macadamia integrifolia 60698 Plants Plants 67.6 9.97e-7   NTclustered gi|2070785503|ref|XR_006144191.1| 60698 g9365 i0 93.333 0.15 45 3 15 0 252 296 1132 1176 PREDICTED: Macadamia integrifolia 28S ribosomal RNA (LOC122092534), rRNA blastn 45 67.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Proteaceae Macadamia Macadamia integrifolia
12596441 12596441 PRJNA532380_P_NODE_27490_length_169_cov_0.866667_g27165_i0 PRJNA532380 27490 169 0.866667 1.46466723 Allium 4678 Plants Plants 313 5.859999999999999e-81   NTclustered gi|2626696215|gb|OR783242.1| 4679 g27165 i0 100 195 169 0 100 0 1 169 17896 18064 Allium cepa chloroplast, complete genome blastn 32955 313 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Amaryllidaceae Allium Allium cepa
13257191 13257191 PRJNA532380_P_NODE_10811_length_281_cov_0.814655_g10486_i0 PRJNA532380 10811 281 0.814655 2.28918055 Gossypium hirsutum 3635 Plants Plants 58.4 5.57e-4   NTclustered gi|2029672871|ref|XR_001686578.2| 3635 g10486 i0 92.683 0.583629893238434 41 2 14 1 178 217 164 124 PREDICTED: Gossypium hirsutum uncharacterized lncRNA (LOC107905663), transcript variant X3, ncRNA blastn 164 58.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Gossypium Gossypium hirsutum
13257365 13257365 PRJNA532380_P_NODE_15751_length_227_cov_3.219101_g15426_i0 PRJNA532380 15751 227 3.219101 7.30735927 Momordica charantia 3673 Plants Plants 150 6.969999999999999e-32   NTclustered gi|1229784874|ref|XM_022290067.1| 3673 g15426 i0 83.851 62.8458149779736 161 23 70 2 39 196 1334 1494 PREDICTED: Momordica charantia tubulin beta-8 chain-like (LOC111015137), mRNA blastn 14266 150 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Momordica Momordica charantia
14532666 14532666 PRJNA532380_P_NODE_22032_length_191_cov_1.464789_g21707_i0 PRJNA532380 22032 191 1.464789 2.79774699 Quercus robur 38942 Plants Plants 348 1.87e-91   NTclustered gi|2293049806|ref|XR_007645197.1| 38942 g21707 i0 99.476 100 191 1 100 0 1 191 3341 3151 PREDICTED: Quercus robur 28S ribosomal RNA (LOC126693076), rRNA blastn 19100 348 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus robur
15806322 15806322 PRJNA532380_P_NODE_18133_length_211_cov_2.123457_g17808_i0 PRJNA532380 18133 211 2.123457 4.48049427 Dipsacus asperoides 180066 Plants Plants 206 1.34e-48   NTclustered gi|1725296341|gb|MK420458.1| 180066 g17808 i0 84.804 97.2037914691943 204 31 97 0 1 204 255 458 Dipsacus asperoides actin 103 (ACT103) mRNA, complete cds blastn 20510 206 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Dipsacales Caprifoliaceae Dipsacus Dipsacus asperoides
16420228 16420228 PRJNA532380_P_NODE_12513_length_257_cov_1.711538_g12188_i0 PRJNA532380 12513 257 1.711538 4.39865266 Helianthus 4231 Plants Plants 453 5.480000000000001e-123   NTclustered gi|1898439955|ref|XR_004880252.1| 4232 g12188 i0 98.444 99.9844357976654 257 4 100 0 1 257 654 910 PREDICTED: Helianthus annuus 18S ribosomal RNA (LOC118487087), rRNA blastn 25696 453 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Helianthus Helianthus annuus
16420258 16420258 PRJNA532380_P_NODE_29633_length_166_cov_1.675214_g29308_i0 PRJNA532380 29633 166 1.675214 2.78085524 Magnoliopsida 3398 Plants Plants 296 5.82e-76   NTclustered gi|1861788074|gb|MT669023.1| 128608 g29308 i0 98.795 99.9397590361446 166 2 100 0 1 166 3097 3262 Cinnamomum verum voucher ZF33 large subunit ribosomal RNA gene, partial sequence blastn 16590 296 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Laurales Lauraceae Cinnamomum Cinnamomum verum
17081324 17081324 PRJNA532380_P_NODE_28634_length_168_cov_0.873950_g28309_i0 PRJNA532380 28634 168 0.87395 1.468236 Eukaryota 2759 Plants Plants 92 1.4200000000000002e-21   NR KAG5584562.1 4109 g28309 i0 85.7 56 56 8 100 0 168 1 128 183 KAG5584562.1 hypothetical protein H5410_044996 [Solanum commersonii] diamond 9408 92.8 0.991379310344828 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum commersonii
18355421 18355421 PRJNA532380_P_NODE_28815_length_167_cov_1.762712_g28490_i0 PRJNA532380 28815 167 1.762712 2.94372904 Brassica oleracea 3712 Plants Plants 52.8 0.014   NTclustered gi|1516569218|emb|LR031875.1| 3712 g28490 i0 100 0.167664670658683 28 0 17 0 18 45 7287150 7287177 Brassica oleracea HDEM genome, scaffold: C9 blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica oleracea
19629442 19629442 PRJNA532380_P_NODE_10776_length_281_cov_1.590517_g10451_i0 PRJNA532380 10776 281 1.590517 4.46935277 Cannabis sativa 3483 Plants Plants 193 1.46e-44   NTclustered gi|2623557329|ref|XM_030630172.2| 3483 g10451 i0 82.569 44.6939501779359 218 38 78 0 14 231 192 409 PREDICTED: Cannabis sativa ADP-ribosylation factor 1 (LOC115702738), mRNA blastn 12559 193 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
22181043 22181043 PRJNA532380_P_NODE_8938_length_315_cov_1.030075_g8613_i0 PRJNA532380 8938 315 1.030075 3.24473625 Eukaryota 2759 Plants Plants 194 3.87e-59   NR XP_022029438.1 4232 g8613 i0 81.6 431.638095238095 103 19 98.1 0 2 310 123 225 XP_022029438.1 serine/threonine-protein phosphatase PP1 [Helianthus annuus] diamond 135966 195 0.994871794871795 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Helianthus Helianthus annuus
24729465 24729465 PRJNA532380_P_NODE_12700_length_255_cov_1.621359_g12375_i0 PRJNA532380 12700 255 1.621359 4.13446545 Oryza sativa 4530 Plants Plants 392 1.1999999999999999e-104   NTclustered gi|32994295|dbj|AK109086.1| 39947 g12375 i0 94.51 283.741176470588 255 13 100 1 1 255 526 779 Oryza sativa Japonica Group cDNA clone:002-154-H10, full insert sequence blastn 72354 392 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
25343856 25343856 PRJNA532380_P_NODE_7820_length_340_cov_4.034364_g7495_i0 PRJNA532380 7820 340 4.034364 13.7168376 Poaceae 4479 Plants Plants 52.8 0.032   NTclustered gi|1897958810|ref|XR_004853261.1| 4577 g7495 i0 100 0.411764705882353 28 0 8 0 154 181 182 209 PREDICTED: Zea mays uncharacterized lncRNA (LOC118473579), transcript variant X2, ncRNA blastn 140 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
27250655 27250655 PRJNA532380_P_NODE_1123_length_992_cov_1.360551_g942_i0 PRJNA532380 1123 992 1.360551 13.49666592 Eukaryota 2759 Plants Plants 80.1 4.14e-13   NR XP_024376907.1 3218 g942 i0 55.9 5.51612903225806 68 29 20.6 1 10 213 128 194 XP_024376907.1 THO complex subunit 4B-like [Physcomitrium patens] diamond 5472 80.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Funariales Funariaceae Physcomitrium Physcomitrium patens
28309360 28309360 PRJNA532380_P_NODE_14086_length_241_cov_1.625000_g13761_i0 PRJNA532380 14086 241 1.625 3.91625 Melastoma candidum 119954 Plants Plants 42.4 0.0463   NR KAI4369866.1 119954 g13761 i0 37.5 0.896265560165975 72 41 84.6 1 33 236 32 103 KAI4369866.1 hypothetical protein MLD38_018264 [Melastoma candidum] diamond 216 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Myrtales Melastomataceae Melastoma Melastoma candidum
28640320 28640320 PRJNA532380_P_NODE_3527_length_553_cov_1.956349_g3209_i0 PRJNA532380 3527 553 1.956349 10.81860997 Eukaryota 2759 Plants Plants 219 7.4e-67   NR XP_050153624.1 3752 g3209 i0 58.1 76.75226039783 179 73 96.6 2 552 19 198 375 XP_050153624.1 citrate synthase, mitochondrial-like isoform X2 [Malus sylvestris] diamond 42444 221 0.990950226244344 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Malus Malus sylvestris
28751333 28751333 PRJNA532380_P_NODE_29607_length_166_cov_1.777778_g29282_i0 PRJNA532380 29607 166 1.777778 2.95111148 Chara braunii 69332 Plants Plants 62.8 1.12e-9   NR GBG72451.1 69332 g29282 i0 50.9 1.96987951807229 55 26 99.4 1 166 2 17 70 GBG72451.1 hypothetical protein CBR_g12025 [Chara braunii] diamond 327 62.8 1 Eukaryota   Viridiplantae Streptophyta Charophyceae Charales Characeae Chara Chara braunii
28892547 28892547 PRJNA532380_P_NODE_14208_length_240_cov_1.628272_g13883_i0 PRJNA532380 14208 240 1.628272 3.9078528 Eukaryota 2759 Plants Plants 113 3.53e-27   NR XP_044352331.1 4565 g13883 i0 60.8 4.9375 79 31 98.8 0 2 238 133 211 XP_044352331.1 probable aspartyl aminopeptidase [Triticum aestivum] diamond 1185 113 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
30677727 30677727 PRJNA532380_P_NODE_3873_length_521_cov_88.063559_g3552_i0 PRJNA532380 3873 521 88.063559 458.81114239 Striga asiatica 4170 Plants Plants 52 3.2e-5   NR GER35861.1 4170 g3552 i0 38.2 0.869481765834933 76 35 38.6 3 324 124 35 107 GER35861.1 calmodulin-like protein [Striga asiatica] diamond 453 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Orobanchaceae Striga Striga asiatica
32449033 32449033 PRJNA532380_P_NODE_27539_length_169_cov_0.866667_g27214_i0 PRJNA532380 27539 169 0.866667 1.46466723 Carya illinoinensis 32201 Plants Plants 83.2 8.95e-18   NR XP_042974939.1 32201 g27214 i0 63.6 0.976331360946746 55 20 97.6 0 3 167 175 229 XP_042974939.1 protein arginine N-methyltransferase 1.5-like [Carya illinoinensis] diamond 165 83.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Juglandaceae Carya Carya illinoinensis
32543949 32543949 PRJNA532380_P_NODE_6299_length_387_cov_16.644970_g5974_i0 PRJNA532380 6299 387 16.64497 64.4160339 Adiantum nelumboides 2759587 Plants Plants 49.7 6.61e-4   NR MCO5602366.1 2759587 g5974 i0 36.6 0.992248062015504 71 39 50.4 2 249 55 437 507 MCO5602366.1 hypothetical protein [Adiantum nelumboides] diamond 384 49.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Adiantum Adiantum nelumboides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;