RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where bioproject = "PRJNA532380" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA532380 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3055106 3055106 PRJNA532380_P_NODE_33063_length_162_cov_0.920354_g32738_i0 PRJNA532380 33063 162 0.920354 1.49097348 Malassezia restricta 76775 Fungi Fungi 300 4.36e-77   NTclustered gi|1546634118|ref|XM_027628719.1| 76775 g32738 i0 100 1 162 0 100 0 1 162 464 625 Malassezia restricta peptidyl-prolyl isomerase D (MRET_2092), partial mRNA blastn 162 300 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
4945608 4945608 PRJNA532380_P_NODE_12904_length_253_cov_1.215686_g12579_i0 PRJNA532380 12904 253 1.215686 3.07568558 Agaricales 5338 Fungi Fungi 412 9.14e-111   NTclustered gi|544161290|gb|KF192813.1| 39966 g12579 i0 97.143 97.4150197628458 245 6 97 1 3 247 933 1176 Hypsizygus marmoreus strain 1-1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; and intergenic spacer, partial sequence blastn 24646 416 0.990384615384615 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Lyophyllaceae Hypsizygus Hypsizygus marmoreus
6881271 6881271 PRJNA532380_P_NODE_15686_length_228_cov_1.357542_g15361_i0 PRJNA532380 15686 228 1.357542 3.09519576 Lentinula edodes 5353 Fungi Fungi 350 6.44e-92   NTclustered gi|2723225103|dbj|LC813565.1| 5353 g15361 i0 94.298 102.517543859649 228 13 100 0 1 228 724 951 Lentinula edodes BCRC:MU30948 DNA, clone Type1 blastn 23374 350 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Lentinula Lentinula edodes
8156971 8156971 PRJNA532380_P_NODE_31647_length_164_cov_0.904348_g31322_i0 PRJNA532380 31647 164 0.904348 1.48313072 Malassezia restricta 76775 Fungi Fungi 298 1.59e-76   NTclustered gi|1546637741|ref|XM_027630512.1| 76775 g31322 i0 99.39 1 164 1 100 0 1 164 1159 996 Malassezia restricta CobW domain protein (MRET_3885), partial mRNA blastn 164 298 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
10045944 10045944 PRJNA532380_P_NODE_12288_length_260_cov_1.393365_g11963_i0 PRJNA532380 12288 260 1.393365 3.622749 Malassezia 55193 Fungi Fungi 418 2.0299999999999994e-112   NTclustered gi|724086716|gb|KM269140.1| 76773 g11963 i0 95.769 100.115384615385 260 10 100 1 1 260 683 425 Malassezia globosa strain 123.1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 26030 418 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
10708059 10708059 PRJNA532380_P_NODE_30289_length_166_cov_0.888889_g29964_i0 PRJNA532380 30289 166 0.888889 1.47555574 Lentinula edodes 5353 Fungi Fungi 279 5.86e-71   NTclustered gi|2185501240|ref|XM_046228721.1| 5353 g29964 i0 96.988 49.0240963855422 166 5 100 0 1 166 513 348 Lentinula edodes uncharacterized protein (C8R40DRAFT_1119226), mRNA blastn 8138 279 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Lentinula Lentinula edodes
11320549 11320549 PRJNA532380_P_NODE_9669_length_300_cov_5.601594_g9344_i0 PRJNA532380 9669 300 5.601594 16.804782 Malassezia 55193 Fungi Fungi 555 1.7399999999999995e-153   NTclustered gi|1101565238|gb|KX808622.1| 55194 g9344 i0 100 99.9933333333333 300 0 100 0 1 300 539 240 Malassezia furfur isolate GDMUZJ2015046 26S ribosomal RNA gene, partial sequence blastn 29998 555 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur
14532897 14532897 PRJNA532380_P_NODE_29812_length_166_cov_0.888889_g29487_i0 PRJNA532380 29812 166 0.888889 1.47555574 Malassezia globosa 76773 Fungi Fungi 307 2.69e-79   NTclustered gi|164655756|ref|XM_001728955.1| 425265 g29487 i0 100 1 166 0 100 0 1 166 1584 1419 Malassezia globosa CBS 7966 uncharacterized protein (MGL_3795), partial mRNA blastn 166 307 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
16420256 16420256 PRJNA532380_P_NODE_27113_length_169_cov_2.116667_g26788_i0 PRJNA532380 27113 169 2.116667 3.57716723 Opisthokonta 33154 Fungi Fungi 313 5.859999999999999e-81   NTclustered gi|1859980207|gb|MT645548.1| 76775 g26788 i0 100 99.9704142011834 169 0 100 0 1 169 307 475 Malassezia restricta strain RM11 large subunit ribosomal RNA gene, partial sequence blastn 16895 313 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17081457 17081457 PRJNA532380_P_NODE_32834_length_162_cov_1.840708_g32509_i0 PRJNA532380 32834 162 1.840708 2.98194696 Rhodocollybia asema 298344 Fungi Fungi 300 4.36e-77   NTclustered gi|66864424|gb|DQ071803.1| 298344 g32509 i0 100 100.604938271605 162 0 100 0 1 162 471 632 Rhodocollybia asema voucher GLM 46024 28S large subunit ribosomal RNA gene, partial sequence blastn 16298 300 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Rhodocollybia Rhodocollybia asema
18968980 18968980 PRJNA532380_P_NODE_20295_length_199_cov_2.266667_g19970_i0 PRJNA532380 20295 199 2.266667 4.51066733 Rhodocollybia 71917 Fungi Fungi 357 3.2699999999999996e-94   NTclustered gi|284468613|gb|GU328560.1| 175244 g19970 i0 98.995 100.05527638191 199 2 100 0 1 199 1130 932 Uncultured Basidiomycota clone man41_soil_C11 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19911 357 1 Eukaryota Opisthokonta Fungi Basidiomycota         uncultured Basidiomycota
19630278 19630278 PRJNA532380_P_NODE_7456_length_349_cov_4.750000_g7131_i0 PRJNA532380 7456 349 4.75 16.5775 Malassezia restricta 76775 Fungi Fungi 477 4.589999999999999e-130   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g7131 i0 92 89.5931232091691 350 13 100 11 1 349 3308 2973 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 31268 477 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
20906109 20906109 PRJNA532380_P_NODE_29177_length_167_cov_0.881356_g28852_i0 PRJNA532380 29177 167 0.881356 1.47186452 Malassezia globosa 76773 Fungi Fungi 303 3.5e-78   NTclustered gi|164661746|ref|XM_001731944.1| 425265 g28852 i0 99.401 1.86826347305389 167 1 100 0 1 167 204 38 Malassezia globosa CBS 7966 uncharacterized protein (MGL_1264), partial mRNA blastn 312 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
20906141 20906141 PRJNA532380_P_NODE_30237_length_166_cov_0.888889_g29912_i0 PRJNA532380 30237 166 0.888889 1.47555574 Malassezia restricta 76775 Fungi Fungi 52.8 0.014   NTclustered gi|1546635592|ref|XR_003525361.1| 76775 g29912 i0 96.774 0.186746987951807 31 1 19 0 95 125 88 58 Malassezia restricta ribonuclease MRP RNA (MRET_nc0004), RNase_MRP_RNA blastn 31 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
22794695 22794695 PRJNA532380_P_NODE_9238_length_308_cov_6.907336_g8913_i0 PRJNA532380 9238 308 6.907336 21.27459488 Malassezia 55193 Fungi Fungi 569 6.419999999999998e-158   NTclustered gi|724086716|gb|KM269140.1| 76773 g8913 i0 100 99.3246753246753 308 0 100 0 1 308 1196 889 Malassezia globosa strain 123.1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 30592 569 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
27203813 27203813 PRJNA532380_P_NODE_31762_length_164_cov_0.904348_g31437_i0 PRJNA532380 31762 164 0.904348 1.48313072 Phakopsora pachyrhizi 170000 Fungi Fungi 67 3.17e-12   NR KAI8455471.1 170000 g31437 i0 66 0.914634146341463 50 17 91.5 0 153 4 8 57 KAI8455471.1 dUTP diphosphatase [Phakopsora pachyrhizi] diamond 150 67 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Phakopsoraceae Phakopsora Phakopsora pachyrhizi
29193571 29193571 PRJNA532380_P_NODE_22329_length_190_cov_1.106383_g22004_i0 PRJNA532380 22329 190 1.106383 2.1021277 Serendipita vermifera MAFF 3 109899 Fungi Fungi 43.5 0.00274   NR KIM29253.1 933852 g22004 i0 52.3 1.68947368421053 44 20 67.9 1 129 1 23 66 KIM29253.1 hypothetical protein M408DRAFT_328926 [Serendipita vermifera MAFF 305830] diamond 321 43.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Sebacinales Serendipitaceae Serendipita Serendipita vermifera
30962340 30962340 PRJNA532380_P_NODE_31454_length_164_cov_0.904348_g31129_i0 PRJNA532380 31454 164 0.904348 1.48313072 Irpex lacteus 5319 Fungi Fungi 103 1.9e-26   NR KAI0763138.1 5319 g31129 i0 98.1 1.97560975609756 54 1 98.8 0 162 1 92 145 KAI0763138.1 hypothetical protein BC629DRAFT_1443291 [Irpex lacteus] diamond 324 103 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Irpicaceae Irpex Irpex lacteus
31341557 31341557 PRJNA532380_P_NODE_20376_length_199_cov_1.386667_g20051_i0 PRJNA532380 20376 199 1.386667 2.75946733 Pisolithus orientalis 936130 Fungi Fungi 75.9 4.45e-14   NR XP_051594294.1 936130 g20051 i0 48.4 17.7437185929648 62 32 93.5 0 199 14 459 520 XP_051594294.1 adaptin N terminal region-domain-containing protein [Pisolithus orientalis] diamond 3531 75.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Pisolithaceae Pisolithus Pisolithus orientalis
31468251 31468251 PRJNA532380_P_NODE_16876_length_219_cov_1.223529_g16551_i0 PRJNA532380 16876 219 1.223529 2.67952851 Schizopora paradoxa 27342 Fungi Fungi 87 4.84e-19   NR KLO20096.1 27342 g16551 i0 51.4 1.98630136986301 72 34 98.6 1 216 1 62 132 KLO20096.1 E2 ubiquitin-conjugating enzyme [Schizopora paradoxa] diamond 435 87 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Schizoporaceae Schizopora Schizopora paradoxa
31767750 31767750 PRJNA532380_P_NODE_30277_length_166_cov_0.888889_g29952_i0 PRJNA532380 30277 166 0.888889 1.47555574 Opisthokonta 33154 Fungi Fungi 102 1.1799999999999999e-23   NR KAK0531972.1 155126 g29952 i0 85.2 168 54 8 97.6 0 163 2 175 228 KAK0531972.1 26S proteasome regulatory subunit 7 [Tilletia horrida] diamond 27888 102 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Tilletiales Tilletiaceae Tilletia Tilletia horrida
32291002 32291002 PRJNA532380_P_NODE_32679_length_163_cov_0.912281_g32354_i0 PRJNA532380 32679 163 0.912281 1.48701803 Ceratobasidium theobromae 1582974 Fungi Fungi 41.2 0.0454   NR KAB5588459.1 1582974 g32354 i0 48.8 0.791411042944785 43 22 79.1 0 150 22 308 350 KAB5588459.1 hypothetical protein CTheo_8100 [Ceratobasidium theobromae] diamond 129 41.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Ceratobasidium Ceratobasidium theobromae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;